Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS14380 and ABIE51_RS14385 are separated by 73 nucleotidesABIE51_RS14385 and ABIE51_RS14390 are separated by 173 nucleotidesABIE51_RS14390 and ABIE51_RS14395 are separated by 312 nucleotidesABIE51_RS14395 and ABIE51_RS14400 are separated by 193 nucleotides ABIE51_RS14380: ABIE51_RS14380 - DUF4242 domain-containing protein, at 3,122,170 to 3,122,448 _RS14380 ABIE51_RS14385: ABIE51_RS14385 - methyltransferase domain-containing protein, at 3,122,522 to 3,123,307 _RS14385 ABIE51_RS14390: ABIE51_RS14390 - response regulator, at 3,123,481 to 3,124,194 _RS14390 ABIE51_RS14395: ABIE51_RS14395 - PAS domain S-box protein, at 3,124,507 to 3,126,027 _RS14395 ABIE51_RS14400: ABIE51_RS14400 - ATP-binding protein, at 3,126,221 to 3,126,982 _RS14400
Group Condition ABIE51_RS14380 ABIE51_RS14385 ABIE51_RS14390 ABIE51_RS14395 ABIE51_RS14400
carbon source Ying_all64 rep B; time point 3 -0.6 N.D. -0.6 -1.5 N.D.
carbon source Ying_all64 rep A; time point 3 -0.3 N.D. -0.3 -0.9 N.D.
carbon source L-Malic (C) +0.2 N.D. -0.2 -1.1 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 N.D. -0.1 -1.0 N.D.
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.4 N.D. -0.6 +0.0 N.D.
carbon source acetate (C) -0.3 N.D. +0.1 -0.7 N.D.
carbon source Glucuronamide (C) +0.1 N.D. -0.1 -0.8 N.D.
carbon source D-Maltose (C) -0.3 N.D. +0.1 -0.6 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.8 N.D. -0.0 +0.3 N.D.
carbon source pyruvate (C) +0.2 N.D. +0.3 -0.7 N.D.
carbon source Ying_Others16 rep B; time point 1 +0.0 N.D. -0.7 +0.5 N.D.
carbon source D-Maltose (C) -0.1 N.D. +0.5 -0.5 N.D.
carbon source D-Glucose-6-Phosphate (C) -0.2 N.D. +0.5 -0.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 -0.3 N.D. -0.3 +0.5 N.D.
carbon source Fumarate (C) +0.2 N.D. +0.4 -0.6 N.D.
carbon source Ying_Others16 rep A; time point 1 +0.6 N.D. -0.3 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.4 N.D. +0.1 +0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.3 N.D. +0.3 +0.4 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.5 N.D. +0.2 +0.7 N.D.
carbon source succinate (C) +0.3 N.D. +0.6 -0.4 N.D.
carbon source propionate (C) +0.5 N.D. +0.5 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 N.D. -0.1 +1.0 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.3 N.D. -0.2 +0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 N.D. +0.0 +1.0 N.D.
carbon source D-Glucuronic Acid (C) +0.2 N.D. +1.0 -0.3 N.D.
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 N.D. -0.1 +0.8 N.D.
carbon source L-Tryptophan (C) -0.1 N.D. +0.3 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 N.D. +0.4 +1.0 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 N.D. +0.2 +1.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 N.D. +0.4 +1.2 N.D.
remove
ABIE51_RS14380
plot		 remove
ABIE51_RS14385
plot		 remove
ABIE51_RS14390		 remove
ABIE51_RS14395
plot		 remove
ABIE51_RS14400
plot