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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS14225 and ABIE51_RS14230 overlap by 4 nucleotides
ABIE51_RS14230 and ABIE51_RS14235 are separated by 90 nucleotides
ABIE51_RS14235 and ABIE51_RS14240 are separated by 299 nucleotides
ABIE51_RS14240 and ABIE51_RS14245 are separated by 17 nucleotides
ABIE51_RS14225: ABIE51_RS14225 - phosphate regulon sensor histidine kinase PhoR, at 3,071,387 to 3,072,715
_RS14225
ABIE51_RS14230: ABIE51_RS14230 - polyphosphate kinase 1, at 3,072,712 to 3,074,808
_RS14230
ABIE51_RS14235: ABIE51_RS14235 - exopolyphosphatase, at 3,074,899 to 3,076,428
_RS14235
ABIE51_RS14240: ABIE51_RS14240 - glucans biosynthesis glucosyltransferase MdoH, at 3,076,728 to 3,078,641
_RS14240
ABIE51_RS14245: ABIE51_RS14245 - glucan biosynthesis protein G, at 3,078,659 to 3,080,191
_RS14245
Group
Condition
ABIE51
_RS14225
ABIE51
_RS14230
ABIE51
_RS14235
ABIE51
_RS14240
ABIE51
_RS14245
carbon source
D-Galactose (C)
-0.4
-0.5
-0.9
-0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
-0.1
-0.7
-0.3
-0.5
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.3
+0.2
-1.3
-0.1
+0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
+0.1
-0.6
-0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
+0.1
-0.7
-0.3
-0.4
carbon source
Ying_sugar7 rep B; time point 2
-1.0
+0.3
-0.2
-0.0
-0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.9
+0.3
+0.1
-0.2
-0.2
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.4
+0.3
-0.8
+0.1
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.2
+0.4
-0.7
-0.3
-0.3
carbon source
D-Maltose (C)
+0.2
+0.4
-0.8
-0.1
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.3
+0.5
-0.4
-0.5
-0.3
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.2
+0.5
-0.6
-0.2
-0.3
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.5
+0.4
-0.5
-0.4
-0.2
carbon source
Ying_all64 rep A; time point 2
+0.2
+0.7
-0.8
+0.1
-0.3
carbon source
Ying_all64 rep C; time point 2
-0.1
+0.7
-0.5
+0.1
-0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.2
+0.6
-0.6
+0.1
-0.1
carbon source
Ying_all64 rep B; time point 2
+0.2
+0.6
-0.7
+0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.3
+1.0
-0.8
+0.0
-0.3
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.3
+1.0
-0.8
+0.1
-0.4
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.3
+0.6
-0.4
-0.1
-0.3
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.3
+0.5
-0.6
+0.1
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.4
+0.7
-0.6
-0.0
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.5
+0.5
-0.5
-0.0
-0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.4
+1.1
-0.9
+0.1
-0.2
carbon source
Ying_all64 rep A; time point 1
+0.3
+0.6
-0.5
+0.2
-0.0
carbon source
Ying_all64 rep B; time point 3
+0.3
+0.8
-0.5
+0.0
+0.1
carbon source
Ying_all64 rep B; time point 1
+0.3
+0.7
-0.4
+0.2
-0.0
carbon source
Ying_all64 rep A; time point 3
+0.5
+0.9
-0.4
+0.1
-0.1
carbon source
Ying_all64 rep C; time point 3
+0.7
+1.0
-0.6
+0.1
-0.1
carbon source
D-Cellobiose (C)
+0.3
+0.7
+0.2
+0.3
+0.1
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ABIE51_RS14235
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