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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS14105 and ABIE51_RS14110 overlap by 4 nucleotides
ABIE51_RS14110 and ABIE51_RS14115 are separated by 141 nucleotides
ABIE51_RS14115 and ABIE51_RS14120 are separated by 138 nucleotides
ABIE51_RS14120 and ABIE51_RS14125 are separated by 181 nucleotides
ABIE51_RS14105: ABIE51_RS14105 - hydroxyacylglutathione hydrolase, at 3,050,602 to 3,051,369
_RS14105
ABIE51_RS14110: ABIE51_RS14110 - lytic transglycosylase domain-containing protein, at 3,051,366 to 3,052,631
_RS14110
ABIE51_RS14115: ABIE51_RS14115 - enoyl-ACP reductase, at 3,052,773 to 3,053,567
_RS14115
ABIE51_RS14120: ABIE51_RS14120 - peptidyl-prolyl cis-trans isomerase, at 3,053,706 to 3,055,685
_RS14120
ABIE51_RS14125: ABIE51_RS14125 - tRNA-Asp, at 3,055,867 to 3,055,943
_RS14125
Group
Condition
ABIE51
_RS14105
ABIE51
_RS14110
ABIE51
_RS14115
ABIE51
_RS14120
ABIE51
_RS14125
carbon source
Ying_sugar7 rep A; time point 2
-3.4
+0.4
N.D.
-0.4
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-3.4
+0.3
N.D.
-0.1
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-2.9
+0.1
N.D.
-0.3
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-3.4
+0.4
N.D.
+0.0
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-3.1
+0.4
N.D.
-0.2
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-2.8
+0.3
N.D.
-0.2
N.D.
carbon source
D-Maltose (C)
-2.2
-0.2
N.D.
-0.2
N.D.
carbon source
D-Galactose (C)
-2.2
-0.1
N.D.
-0.0
N.D.
carbon source
Ying_sugar7 rep C; time point 1
-2.3
+0.3
N.D.
-0.3
N.D.
carbon source
Ying_sugar7 rep A; time point 1
-2.2
+0.2
N.D.
-0.2
N.D.
carbon source
L-Malic (C)
-1.3
+0.1
N.D.
-0.5
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.0
N.D.
-1.6
N.D.
carbon source
D-Galactose (C)
-1.3
-0.1
N.D.
-0.3
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.7
+0.1
N.D.
-0.8
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.8
+0.2
N.D.
-2.3
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.4
+0.0
N.D.
-0.9
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.2
+0.1
N.D.
-1.2
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.8
+0.1
N.D.
-2.1
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
+0.1
N.D.
-1.2
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.0
+0.2
N.D.
-1.3
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.7
+0.2
N.D.
-2.0
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+1.0
+0.1
N.D.
-2.2
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.8
+0.3
N.D.
-2.0
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.7
+0.2
N.D.
-1.7
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.6
+0.3
N.D.
-1.6
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.8
+0.3
N.D.
-1.6
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.7
+0.3
N.D.
-1.4
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.9
+0.3
N.D.
-1.4
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.8
+0.2
N.D.
-1.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
+1.0
+0.3
N.D.
-1.2
N.D.
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