Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS13975 and ABIE51_RS13980 are separated by 3 nucleotidesABIE51_RS13980 and ABIE51_RS13985 are separated by 140 nucleotidesABIE51_RS13985 and ABIE51_RS13990 are separated by 54 nucleotidesABIE51_RS13990 and ABIE51_RS13995 overlap by 8 nucleotides ABIE51_RS13975: ABIE51_RS13975 - Maf family nucleotide pyrophosphatase, at 3,028,921 to 3,029,505 _RS13975 ABIE51_RS13980: ABIE51_RS13980 - glycosyltransferase family 39 protein, at 3,029,509 to 3,031,356 _RS13980 ABIE51_RS13985: ABIE51_RS13985 - AAA family ATPase, at 3,031,497 to 3,032,450 _RS13985 ABIE51_RS13990: ABIE51_RS13990 - DUF58 domain-containing protein, at 3,032,505 to 3,033,434 _RS13990 ABIE51_RS13995: ABIE51_RS13995 - DUF3488 and transglutaminase-like domain-containing protein, at 3,033,427 to 3,035,397 _RS13995
Group Condition ABIE51_RS13975 ABIE51_RS13980 ABIE51_RS13985 ABIE51_RS13990 ABIE51_RS13995
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.5 -0.2 -0.1 -0.0 -0.1
stress R2A with 3-octanone 5.31033333333333 mM -0.0 -0.2 -0.2 -0.2 -0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.1 -0.5 +0.2 -0.1 +0.1
carbon source Ying_AminoAcid20 rep A; time point 1 +0.2 -0.7 +0.2 +0.1 -0.0
carbon source Ying_Others16 rep A; time point 1 -0.1 -0.2 +0.3 +0.1 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.1 -0.5 +0.2 -0.0 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.3 -0.5 +0.1 -0.0 -0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.3 -0.4 -0.0 +0.2 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.3 -0.5 +0.3 -0.0 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.2 -0.4 +0.2 -0.0 +0.1
carbon source Ying_AminoAcid20 rep C; time point 1 +0.2 -0.4 +0.2 -0.0 +0.1
carbon source Ying_sugar7 rep B; time point 3 -0.1 -0.5 +0.3 +0.4 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.3 -0.5 +0.1 +0.2 +0.0
carbon source Ying_AminoAcid20 rep B; time point 1 +0.3 -0.4 +0.2 +0.0 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.2 -0.4 +0.3 -0.0 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 -0.3 +0.2 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.3 -0.3 +0.1 +0.1 +0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.4 -0.2 +0.1 +0.1 -0.1
carbon source Ying_all64 rep C; time point 1 +0.4 -0.3 +0.1 +0.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.5 -0.3 +0.2 +0.1 -0.0
carbon source pyruvate (C) +0.1 -0.2 +0.2 +0.1 +0.3
carbon source Ying_sugar7 rep A; time point 3 -0.0 -0.3 +0.3 +0.4 +0.1
carbon source Ying_all64 rep C; time point 2 +0.3 -0.2 +0.2 +0.1 +0.1
carbon source Ying_sugar7 rep C; time point 3 -0.0 -0.4 +0.4 +0.4 +0.2
carbon source D-Cellobiose (C) -0.1 -0.5 +0.4 +0.3 +0.5
carbon source Ying_sugar7 rep C; time point 1 +0.3 -0.3 +0.3 +0.2 +0.2
carbon source Ying_sugar7 rep C; time point 2 +0.3 -0.4 +0.5 +0.2 +0.3
carbon source Ying_sugar7 rep A; time point 2 +0.3 -0.4 +0.4 +0.3 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.2 -0.4 +0.4 +0.3 +0.3
carbon source Ying_sugar7 rep A; time point 1 +0.3 -0.2 +0.4 +0.2 +0.2
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ABIE51_RS13975
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ABIE51_RS13980
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ABIE51_RS13990
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ABIE51_RS13995
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