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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS13900 and ABIE51_RS13905 are separated by 43 nucleotides
ABIE51_RS13905 and ABIE51_RS13910 overlap by 4 nucleotides
ABIE51_RS13910 and ABIE51_RS13915 overlap by 4 nucleotides
ABIE51_RS13915 and ABIE51_RS13920 overlap by 4 nucleotides
ABIE51_RS13900: ABIE51_RS13900 - hypothetical protein, at 3,016,484 to 3,016,984
_RS13900
ABIE51_RS13905: ABIE51_RS13905 - PilZ domain-containing protein, at 3,017,028 to 3,017,393
_RS13905
ABIE51_RS13910: ABIE51_RS13910 - DNA polymerase III subunit delta', at 3,017,390 to 3,018,370
_RS13910
ABIE51_RS13915: ABIE51_RS13915 - dTMP kinase, at 3,018,367 to 3,019,005
_RS13915
ABIE51_RS13920: ABIE51_RS13920 - endolytic transglycosylase MltG, at 3,019,002 to 3,020,096
_RS13920
Group
Condition
ABIE51
_RS13900
ABIE51
_RS13905
ABIE51
_RS13910
ABIE51
_RS13915
ABIE51
_RS13920
carbon source
Ying_all64 rep B; time point 2
+0.1
-0.1
N.D.
N.D.
-0.9
carbon source
Ying_all64 rep C; time point 2
+0.1
-0.2
N.D.
N.D.
-0.7
carbon source
Ying_all64 rep B; time point 3
-0.0
+0.0
N.D.
N.D.
-0.8
carbon source
Ying_all64 rep C; time point 3
+0.1
-0.2
N.D.
N.D.
-0.6
carbon source
Ying_all64 rep C; time point 1
+0.0
-0.1
N.D.
N.D.
-0.7
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.0
-0.0
N.D.
N.D.
-0.7
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.0
-0.1
N.D.
N.D.
-0.6
carbon source
Ying_all64 rep B; time point 1
+0.0
-0.1
N.D.
N.D.
-0.6
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.1
-0.2
N.D.
N.D.
-0.6
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
+0.0
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.1
+0.0
N.D.
N.D.
-0.8
carbon source
Ying_all64 rep A; time point 2
+0.1
-0.1
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
-0.0
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.2
-0.1
N.D.
N.D.
-0.7
carbon source
Ying_all64 rep A; time point 1
+0.0
-0.1
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.0
-0.1
N.D.
N.D.
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.0
+0.0
N.D.
N.D.
-0.7
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
-0.0
N.D.
N.D.
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.0
-0.0
N.D.
N.D.
-0.6
carbon source
Ying_sugar7 rep C; time point 1
+0.0
-0.2
N.D.
N.D.
-0.4
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.0
+0.0
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.0
N.D.
N.D.
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.0
+0.1
N.D.
N.D.
-0.5
carbon source
succinate (C)
-0.3
-0.3
N.D.
N.D.
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
+0.1
N.D.
N.D.
-0.6
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
+0.1
N.D.
N.D.
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.0
+0.1
N.D.
N.D.
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.1
-0.0
N.D.
N.D.
-0.5
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.0
+0.1
N.D.
N.D.
-0.5
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
+0.0
N.D.
N.D.
-0.5
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