Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS13200 and ABIE51_RS13205 are separated by 7 nucleotidesABIE51_RS13205 and ABIE51_RS13210 are separated by 11 nucleotidesABIE51_RS13210 and ABIE51_RS13215 are separated by 157 nucleotidesABIE51_RS13215 and ABIE51_RS13220 are separated by 105 nucleotides ABIE51_RS13200: ABIE51_RS13200 - acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha, at 2,847,987 to 2,850,020 _RS13200 ABIE51_RS13205: ABIE51_RS13205 - hydroxymethylglutaryl-CoA lyase, at 2,850,028 to 2,850,921 _RS13205 ABIE51_RS13210: ABIE51_RS13210 - EAL domain-containing protein, at 2,850,933 to 2,853,500 _RS13210 ABIE51_RS13215: ABIE51_RS13215 - SDR family NAD(P)-dependent oxidoreductase, at 2,853,658 to 2,854,428 _RS13215 ABIE51_RS13220: ABIE51_RS13220 - elongation factor P-like protein YeiP, at 2,854,534 to 2,855,100 _RS13220
Group Condition ABIE51_RS13200 ABIE51_RS13205 ABIE51_RS13210 ABIE51_RS13215 ABIE51_RS13220
carbon source casaminos (C) -1.7 -2.4 +0.1 N.D. +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.5 -4.3 +0.3 N.D. +0.6
carbon source casaminos (C) -1.8 -2.2 +0.1 N.D. +0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -0.6 -3.8 +0.3 N.D. +0.5
carbon source Ying_AminoAcid20 rep A; time point 2 -0.5 -3.8 +0.3 N.D. +0.5
carbon source Ying_AminoAcid20 rep A; time point 3 -0.8 -3.8 +0.3 N.D. +0.8
carbon source Ying_AminoAcid20 rep C; time point 3 -0.7 -3.7 +0.2 N.D. +0.7
carbon source Ying_AminoAcid20 rep B; time point 3 -0.7 -3.6 +0.3 N.D. +0.8
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.2 -2.9 -0.1 N.D. -0.1
dmso control DMSO control +0.0 -2.5 +0.0 N.D. -0.1
stress R2A with 3-octanone 1.77016666666667 mM -0.0 -2.3 -0.1 N.D. -0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.3 -2.9 -0.0 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.0 -2.6 +0.1 N.D. +0.1
stress R2A with 3-octanone 1.77016666666667 mM +0.0 -2.3 -0.1 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 -2.4 +0.1 N.D. -0.0
stress R2A with 3-octanone 2.65516666666667 mM +0.1 -2.3 -0.0 N.D. -0.1
r2a no stress control R2A no stress control -0.0 -2.4 -0.1 N.D. +0.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.2 -2.2 +0.1 N.D. +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 -2.3 +0.1 N.D. -0.0
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.3 -2.5 +0.0 N.D. +0.1
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.1 -2.0 -0.1 N.D. -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -0.5 -2.1 +0.3 N.D. +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 -0.4 -2.3 +0.3 N.D. +0.5
carbon source 2-Deoxy-D-Ribose (C) -0.1 -2.0 +0.0 N.D. +0.1
stress R2A with 3-octanone 1.77016666666667 mM +0.1 -1.9 +0.0 N.D. -0.2
stress R2A with 1-octen-3-ol 0.904549 mM +0.2 -2.1 +0.1 N.D. +0.1
stress R2A with 3-octanone 5.31033333333333 mM +0.2 -1.9 +0.0 N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 -2.1 +0.1 N.D. +0.0
carbon source Ying_AminoAcid20 rep C; time point 1 -0.3 -2.0 +0.2 N.D. +0.4
carbon source succinate (C) +0.1 -1.6 +0.2 N.D. -0.3
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