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Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS13150 and ABIE51_RS13155 are separated by 319 nucleotides
ABIE51_RS13155 and ABIE51_RS13160 are separated by 139 nucleotides
ABIE51_RS13160 and ABIE51_RS13165 are separated by 195 nucleotides
ABIE51_RS13165 and ABIE51_RS13170 overlap by 4 nucleotides
ABIE51_RS13150: ABIE51_RS13150 - hypothetical protein, at 2,840,113 to 2,840,478
_RS13150
ABIE51_RS13155: ABIE51_RS13155 - hypothetical protein, at 2,840,798 to 2,841,175
_RS13155
ABIE51_RS13160: ABIE51_RS13160 - carboxyl transferase domain-containing protein, at 2,841,315 to 2,842,940
_RS13160
ABIE51_RS13165: ABIE51_RS13165 - polymer-forming cytoskeletal protein, at 2,843,136 to 2,843,738
_RS13165
ABIE51_RS13170: ABIE51_RS13170 - hypothetical protein, at 2,843,735 to 2,844,097
_RS13170
Group
Condition
ABIE51
_RS13150
ABIE51
_RS13155
ABIE51
_RS13160
ABIE51
_RS13165
ABIE51
_RS13170
carbon source
casaminos (C)
N.D.
N.D.
-2.0
N.D.
-0.2
carbon source
casaminos (C)
N.D.
N.D.
-2.0
N.D.
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
N.D.
N.D.
-0.4
N.D.
-0.7
carbon source
D-Cellobiose (C)
N.D.
N.D.
+0.0
N.D.
-1.0
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
N.D.
-0.1
N.D.
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
N.D.
N.D.
-0.0
N.D.
-0.8
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
N.D.
+0.1
N.D.
-0.9
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
N.D.
-0.2
N.D.
-0.6
r2a no stress control
R2A no stress control
N.D.
N.D.
-0.0
N.D.
-0.7
carbon source
Ying_sugar7 rep A; time point 2
N.D.
N.D.
-0.4
N.D.
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
N.D.
N.D.
-0.1
N.D.
-0.6
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
N.D.
-0.0
N.D.
-0.6
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
N.D.
-0.1
N.D.
-0.5
carbon source
Ying_sugar7 rep A; time point 1
N.D.
N.D.
-0.2
N.D.
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
N.D.
N.D.
-0.0
N.D.
-0.6
carbon source
Ying_all64 rep B; time point 2
N.D.
N.D.
+0.2
N.D.
-0.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
N.D.
+0.2
N.D.
-0.7
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
+0.1
N.D.
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
N.D.
+0.2
N.D.
-0.5
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
N.D.
+0.2
N.D.
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
N.D.
+0.2
N.D.
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
+0.2
N.D.
-0.4
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
N.D.
-0.5
N.D.
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
+0.2
N.D.
-0.4
carbon source
Ying_sugar7 rep A; time point 3
N.D.
N.D.
-0.4
N.D.
+0.3
carbon source
Ying_sugar7 rep C; time point 3
N.D.
N.D.
-0.4
N.D.
+0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
N.D.
-0.4
N.D.
+0.4
stress
R2A with 3-octanone 1.77016666666667 mM
N.D.
N.D.
+0.1
N.D.
+0.5
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
N.D.
+0.1
N.D.
+0.7
carbon source
Ying_all64 rep B; time point 3
N.D.
N.D.
+0.3
N.D.
+0.5
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