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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12975 and ABIE51_RS12980 are separated by 6 nucleotides
ABIE51_RS12980 and ABIE51_RS12985 are separated by 52 nucleotides
ABIE51_RS12985 and ABIE51_RS12990 are separated by 122 nucleotides
ABIE51_RS12990 and ABIE51_RS12995 are separated by 140 nucleotides
ABIE51_RS12975: ABIE51_RS12975 - tetratricopeptide repeat protein, at 2,798,367 to 2,799,341
_RS12975
ABIE51_RS12980: ABIE51_RS12980 - Gfo/Idh/MocA family oxidoreductase, at 2,799,348 to 2,800,448
_RS12980
ABIE51_RS12985: ABIE51_RS12985 - M14 family metallocarboxypeptidase, at 2,800,501 to 2,801,421
_RS12985
ABIE51_RS12990: ABIE51_RS12990 - hypothetical protein, at 2,801,544 to 2,801,804
_RS12990
ABIE51_RS12995: ABIE51_RS12995 - DUF3228 family protein, at 2,801,945 to 2,802,502
_RS12995
Group
Condition
ABIE51
_RS12975
ABIE51
_RS12980
ABIE51
_RS12985
ABIE51
_RS12990
ABIE51
_RS12995
carbon source
2-Deoxy-D-Ribose (C)
-0.3
-0.0
+0.0
-0.6
-0.6
dmso control
DMSO control
-0.2
-0.1
-0.0
-0.4
-0.5
carbon source
Ying_sugar7 rep A; time point 2
-0.3
-0.1
-0.2
-0.3
-0.0
carbon source
succinate (C)
+0.1
-0.1
-0.1
-0.7
+0.0
carbon source
Ying_Others16 rep B; time point 1
-0.4
+0.1
-0.0
-0.5
+0.2
carbon source
L-Malic (C)
+0.5
-0.1
-0.3
-0.8
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.1
+0.0
-0.3
-0.4
-0.1
carbon source
Ying_all64 rep B; time point 1
-0.2
-0.0
-0.2
-0.4
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
+0.1
+0.1
-0.4
-0.2
carbon source
Ying_sugar7 rep B; time point 2
-0.2
-0.1
-0.3
-0.2
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.2
+0.2
-0.2
-0.2
carbon source
L-Glutamine (C)
+0.0
-0.0
-0.1
-0.6
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.3
+0.1
-0.1
+0.2
-0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.3
+0.1
+0.1
-0.4
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.2
-0.0
+0.3
-0.2
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
+0.2
+0.2
-0.4
-0.1
carbon source
casaminos (C)
+0.1
-0.0
-0.3
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
+0.0
-0.2
-0.3
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.3
+0.0
-0.1
-0.2
+0.3
carbon source
D-Cellobiose (C)
-0.3
-0.2
+0.1
-0.3
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.3
+0.1
-0.4
+0.2
+0.2
carbon source
Ying_sugar7 rep A; time point 3
+0.1
+0.1
-0.1
-0.4
+0.3
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.2
+0.1
-0.2
-0.1
+0.3
carbon source
Ying_sugar7 rep C; time point 2
-0.3
+0.2
-0.2
-0.1
+0.3
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.0
+0.1
+0.2
+0.2
-0.3
carbon source
D-Galactose (C)
-0.3
-0.1
+0.2
-0.1
+0.5
carbon source
Fumarate (C)
+0.1
-0.0
-0.3
+0.3
+0.4
carbon source
L-tyrosine (C)
-0.2
-0.2
+0.1
+0.3
+0.5
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
+0.1
+0.4
-0.2
+0.2
carbon source
propionate (C)
-0.1
+0.3
+0.2
+0.2
+0.3
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