Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS12960 and ABIE51_RS12965 are separated by 27 nucleotidesABIE51_RS12965 and ABIE51_RS12970 are separated by 68 nucleotidesABIE51_RS12970 and ABIE51_RS12975 are separated by 54 nucleotidesABIE51_RS12975 and ABIE51_RS12980 are separated by 6 nucleotides ABIE51_RS12960: ABIE51_RS12960 - DUF4136 domain-containing protein, at 2,796,109 to 2,796,741 _RS12960 ABIE51_RS12965: ABIE51_RS12965 - hypothetical protein, at 2,796,769 to 2,797,059 _RS12965 ABIE51_RS12970: ABIE51_RS12970 - glycoside hydrolase family 18 protein, at 2,797,128 to 2,798,312 _RS12970 ABIE51_RS12975: ABIE51_RS12975 - tetratricopeptide repeat protein, at 2,798,367 to 2,799,341 _RS12975 ABIE51_RS12980: ABIE51_RS12980 - Gfo/Idh/MocA family oxidoreductase, at 2,799,348 to 2,800,448 _RS12980
Group Condition ABIE51_RS12960 ABIE51_RS12965 ABIE51_RS12970 ABIE51_RS12975 ABIE51_RS12980
carbon source Ying_Others16 rep B; time point 1 -0.0 -0.7 -0.1 -0.4 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.3 -0.7 +0.0 -0.3 +0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.3 -0.8 +0.1 -0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.4 -0.4 +0.0 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 -0.5 +0.1 -0.3 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.3 -0.5 +0.0 -0.3 +0.1
stress R2A with 2-pentyl-furan 21.3684 mM +0.1 -0.7 -0.0 -0.3 -0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.3 -0.4 +0.0 -0.3 +0.1
carbon source D-Glucuronic Acid (C) -0.7 -0.1 +0.2 -0.0 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 -0.5 +0.1 -0.1 +0.0
dmso control DMSO control +0.1 -0.6 -0.0 -0.2 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.3 -0.7 +0.1 -0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 -0.4 +0.2 -0.3 +0.0
stress R2A with 1-octen-3-ol 1.3568235 mM -0.1 -0.5 +0.1 -0.2 +0.1
carbon source D-Maltose (C) -0.1 -0.6 +0.1 +0.2 -0.1
stress R2A with 3-octanone 1.77016666666667 mM -0.2 -0.4 -0.1 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.3 -0.5 +0.1 -0.3 +0.1
carbon source propionate (C) +0.1 -0.8 +0.1 -0.1 +0.3
carbon source D-Galactose (C) -0.3 +0.6 -0.1 -0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.5 +0.3 +0.1 +0.2 +0.2
carbon source L-tyrosine (C) +0.3 +0.4 +0.1 -0.2 -0.2
carbon source L-Malic (C) +0.3 -0.2 +0.2 +0.5 -0.1
carbon source D-Maltose (C) -0.0 +0.7 +0.2 +0.1 -0.1
stress R2A with 3-octanone 1.77016666666667 mM -0.1 +0.9 -0.1 +0.2 +0.0
carbon source Ying_all64 rep A; time point 3 +0.1 +0.8 -0.0 +0.0 +0.2
carbon source Ying_sugar7 rep A; time point 3 +0.0 +0.8 +0.0 +0.1 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 +0.8 -0.0 +0.2 -0.0
carbon source Glucuronamide (C) +0.3 +0.8 +0.0 +0.1 -0.1
carbon source Fumarate (C) +0.5 +0.5 +0.2 -0.0 +0.3
carbon source Ying_all64 rep B; time point 3 +0.5 +0.9 +0.0 +0.2 +0.0
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