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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12945 and ABIE51_RS12950 are separated by 74 nucleotides
ABIE51_RS12950 and ABIE51_RS12955 are separated by 346 nucleotides
ABIE51_RS12955 and ABIE51_RS12960 are separated by 127 nucleotides
ABIE51_RS12960 and ABIE51_RS12965 are separated by 27 nucleotides
ABIE51_RS12945: ABIE51_RS12945 - sensor domain-containing diguanylate cyclase, at 2,793,264 to 2,794,304
_RS12945
ABIE51_RS12950: ABIE51_RS12950 - peroxiredoxin, at 2,794,379 to 2,794,930
_RS12950
ABIE51_RS12955: ABIE51_RS12955 - hypothetical protein, at 2,795,277 to 2,795,981
_RS12955
ABIE51_RS12960: ABIE51_RS12960 - DUF4136 domain-containing protein, at 2,796,109 to 2,796,741
_RS12960
ABIE51_RS12965: ABIE51_RS12965 - hypothetical protein, at 2,796,769 to 2,797,059
_RS12965
Group
Condition
ABIE51
_RS12945
ABIE51
_RS12950
ABIE51
_RS12955
ABIE51
_RS12960
ABIE51
_RS12965
carbon source
propionate (C)
+0.1
-0.3
-0.2
+0.1
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.0
+0.0
-0.3
-0.3
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
-0.0
+0.1
-0.3
-0.8
carbon source
D-Glucuronic Acid (C)
+0.1
-0.1
-0.2
-0.7
-0.1
carbon source
pyruvate (C)
-0.0
+0.1
-0.1
-0.1
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.1
-0.0
-0.1
-0.3
-0.5
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.3
-0.0
+0.1
-0.3
-0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
-0.1
+0.0
+0.1
-0.7
carbon source
Fumarate (C)
+0.3
-0.2
-0.4
-0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
-0.2
+0.2
-0.3
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
+0.0
+0.1
-0.4
-0.4
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
+0.2
+0.0
-0.3
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.2
+0.1
-0.2
-0.5
+0.3
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
+0.0
-0.1
+0.3
-0.7
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.1
+0.0
-0.1
+0.3
-0.5
dmso control
DMSO control
+0.1
+0.1
+0.4
-0.2
-0.4
carbon source
D-Galactose (C)
+0.0
-0.3
+0.0
-0.3
+0.6
carbon source
Ying_Others16 rep A; time point 1
+0.2
+0.2
-0.2
-0.2
+0.3
carbon source
L-tyrosine (C)
+0.2
-0.2
-0.3
+0.3
+0.4
carbon source
succinate (C)
-0.1
+0.1
+0.3
-0.2
+0.5
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
-0.0
-0.1
-0.1
+0.9
carbon source
D-Maltose (C)
+0.0
-0.2
+0.2
-0.0
+0.7
carbon source
Ying_sugar7 rep A; time point 3
-0.2
+0.1
-0.0
+0.0
+0.8
carbon source
Ying_sugar7 rep B; time point 3
-0.2
+0.0
+0.2
+0.2
+0.4
carbon source
Glucuronamide (C)
-0.3
-0.0
+0.0
+0.3
+0.8
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-0.0
+0.1
+0.0
+0.8
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.2
-0.0
+0.2
+0.2
+0.8
carbon source
Ying_all64 rep A; time point 3
-0.2
+0.1
+0.2
+0.1
+0.8
carbon source
Fumarate (C)
-0.0
+0.2
+0.1
+0.5
+0.5
carbon source
Ying_all64 rep B; time point 3
-0.1
-0.3
+0.3
+0.5
+0.9
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ABIE51_RS12955
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