Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS12945 and ABIE51_RS12950 are separated by 74 nucleotidesABIE51_RS12950 and ABIE51_RS12955 are separated by 346 nucleotidesABIE51_RS12955 and ABIE51_RS12960 are separated by 127 nucleotidesABIE51_RS12960 and ABIE51_RS12965 are separated by 27 nucleotides ABIE51_RS12945: ABIE51_RS12945 - sensor domain-containing diguanylate cyclase, at 2,793,264 to 2,794,304 _RS12945 ABIE51_RS12950: ABIE51_RS12950 - peroxiredoxin, at 2,794,379 to 2,794,930 _RS12950 ABIE51_RS12955: ABIE51_RS12955 - hypothetical protein, at 2,795,277 to 2,795,981 _RS12955 ABIE51_RS12960: ABIE51_RS12960 - DUF4136 domain-containing protein, at 2,796,109 to 2,796,741 _RS12960 ABIE51_RS12965: ABIE51_RS12965 - hypothetical protein, at 2,796,769 to 2,797,059 _RS12965
Group Condition ABIE51_RS12945 ABIE51_RS12950 ABIE51_RS12955 ABIE51_RS12960 ABIE51_RS12965
carbon source propionate (C) +0.1 -0.3 -0.2 +0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.0 +0.0 -0.3 -0.3 -0.5
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.0 -0.0 +0.1 -0.3 -0.8
carbon source D-Glucuronic Acid (C) +0.1 -0.1 -0.2 -0.7 -0.1
carbon source pyruvate (C) -0.0 +0.1 -0.1 -0.1 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.1 -0.0 -0.1 -0.3 -0.5
stress R2A with 2-pentyl-furan 21.3684 mM -0.3 -0.0 +0.1 -0.3 -0.3
stress R2A with 2-pentyl-furan 21.3684 mM -0.2 -0.1 +0.0 +0.1 -0.7
carbon source Fumarate (C) +0.3 -0.2 -0.4 -0.2 -0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.1 -0.2 +0.2 -0.3 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.0 +0.1 -0.4 -0.4
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 +0.2 +0.0 -0.3 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 +0.1 -0.2 -0.5 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.2 +0.0 -0.1 +0.3 -0.7
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 +0.0 -0.1 +0.3 -0.5
dmso control DMSO control +0.1 +0.1 +0.4 -0.2 -0.4
carbon source D-Galactose (C) +0.0 -0.3 +0.0 -0.3 +0.6
carbon source Ying_Others16 rep A; time point 1 +0.2 +0.2 -0.2 -0.2 +0.3
carbon source L-tyrosine (C) +0.2 -0.2 -0.3 +0.3 +0.4
carbon source succinate (C) -0.1 +0.1 +0.3 -0.2 +0.5
stress R2A with 3-octanone 1.77016666666667 mM -0.1 -0.0 -0.1 -0.1 +0.9
carbon source D-Maltose (C) +0.0 -0.2 +0.2 -0.0 +0.7
carbon source Ying_sugar7 rep A; time point 3 -0.2 +0.1 -0.0 +0.0 +0.8
carbon source Ying_sugar7 rep B; time point 3 -0.2 +0.0 +0.2 +0.2 +0.4
carbon source Glucuronamide (C) -0.3 -0.0 +0.0 +0.3 +0.8
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.0 +0.1 +0.0 +0.8
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 -0.0 +0.2 +0.2 +0.8
carbon source Ying_all64 rep A; time point 3 -0.2 +0.1 +0.2 +0.1 +0.8
carbon source Fumarate (C) -0.0 +0.2 +0.1 +0.5 +0.5
carbon source Ying_all64 rep B; time point 3 -0.1 -0.3 +0.3 +0.5 +0.9
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