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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12850 and ABIE51_RS12855 are separated by 141 nucleotides
ABIE51_RS12855 and ABIE51_RS12860 are separated by 63 nucleotides
ABIE51_RS12860 and ABIE51_RS12865 are separated by 52 nucleotides
ABIE51_RS12865 and ABIE51_RS12870 are separated by 123 nucleotides
ABIE51_RS12850: ABIE51_RS12850 - polysaccharide biosynthesis/export family protein, at 2,774,254 to 2,775,378
_RS12850
ABIE51_RS12855: ABIE51_RS12855 - glutathione S-transferase family protein, at 2,775,520 to 2,776,176
_RS12855
ABIE51_RS12860: ABIE51_RS12860 - hypothetical protein, at 2,776,240 to 2,777,136
_RS12860
ABIE51_RS12865: ABIE51_RS12865 - VOC family protein, at 2,777,189 to 2,777,665
_RS12865
ABIE51_RS12870: ABIE51_RS12870 - mechanosensitive ion channel family protein, at 2,777,789 to 2,778,361
_RS12870
Group
Condition
ABIE51
_RS12850
ABIE51
_RS12855
ABIE51
_RS12860
ABIE51
_RS12865
ABIE51
_RS12870
carbon source
2-Deoxy-D-Ribose (C)
+0.1
-0.1
-0.0
+0.4
-2.6
carbon source
Ying_all64 rep B; time point 3
-0.1
-0.2
-0.5
-0.1
-0.5
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.1
-0.0
-0.3
-0.6
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
-0.3
-0.2
+0.2
-0.2
carbon source
Ying_Others16 rep A; time point 1
+0.0
+0.1
+0.1
-0.2
-0.5
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.2
+0.0
+0.0
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
+0.2
+0.3
-0.2
-0.6
carbon source
Glucuronamide (C)
+0.2
+0.0
-0.1
-1.0
+0.6
carbon source
D-Galactose (C)
+0.1
+0.1
+0.1
+0.2
-0.7
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.0
-0.1
+0.4
-0.2
-0.4
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.0
+0.1
+0.3
+0.2
-0.6
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
-0.0
+0.1
-0.5
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.0
+0.2
+0.4
-0.6
-0.1
stress
R2A with 3-octanone 5.31033333333333 mM
+0.0
-0.2
-0.1
-0.3
+0.5
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
-0.1
-0.2
+0.3
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-0.2
-0.2
+0.1
+0.5
carbon source
D-Glucuronic Acid (C)
-0.1
-0.3
-0.4
+0.3
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.0
+0.5
+0.2
-0.1
-0.4
carbon source
L-Tryptophan (C)
-0.0
-0.3
-0.1
+0.4
+0.3
carbon source
D-Maltose (C)
+0.4
-0.1
-0.1
+0.4
+0.0
carbon source
D-Maltose (C)
+0.1
-0.2
+0.2
+0.5
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
-0.2
+0.1
-0.1
+0.7
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.0
-0.1
-0.1
+0.3
+0.7
carbon source
pyruvate (C)
+0.3
+0.2
+0.2
-0.2
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.0
+0.1
-0.1
+0.5
+0.3
carbon source
L-Malic (C)
+0.1
+0.3
-0.3
+0.3
+0.4
carbon source
succinate (C)
+0.1
+0.1
-0.2
+0.3
+0.7
carbon source
D-Cellobiose (C)
+0.4
+0.2
+0.0
-0.2
+0.6
carbon source
L-Asparagine (C)
+0.2
+0.2
-0.1
+0.1
+1.2
carbon source
D-Galactose (C)
+0.6
-0.1
+0.4
-0.0
+0.8
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