Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS12790 and ABIE51_RS12795 are separated by 99 nucleotidesABIE51_RS12795 and ABIE51_RS12800 are separated by 278 nucleotidesABIE51_RS12800 and ABIE51_RS12805 are separated by 125 nucleotidesABIE51_RS12805 and ABIE51_RS12810 are separated by 4 nucleotides ABIE51_RS12790: ABIE51_RS12790 - non-homologous end-joining DNA ligase, at 2,757,738 to 2,758,610 _RS12790 ABIE51_RS12795: ABIE51_RS12795 - low molecular weight protein-tyrosine-phosphatase, at 2,758,710 to 2,759,144 _RS12795 ABIE51_RS12800: ABIE51_RS12800 - UDP-N-acetylglucosamine 2-epimerase, at 2,759,423 to 2,761,852 _RS12800 ABIE51_RS12805: ABIE51_RS12805 - polysaccharide biosynthesis tyrosine autokinase, at 2,761,978 to 2,764,254 _RS12805 ABIE51_RS12810: ABIE51_RS12810 - asparagine synthase-related protein, at 2,764,259 to 2,765,698 _RS12810
Group Condition ABIE51_RS12790 ABIE51_RS12795 ABIE51_RS12800 ABIE51_RS12805 ABIE51_RS12810
carbon source 2-Deoxy-D-Ribose (C) -0.1 -1.0 +0.0 -0.1 -0.2
carbon source L-Glutamine (C) -0.1 -0.5 -0.2 +0.0 -0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 -0.3 -0.2 +0.1 -0.2
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.3 -0.2 +0.1 -0.2
carbon source Ying_all64 rep A; time point 3 +0.1 -0.2 -0.1 -0.2 -0.2
carbon source propionate (C) +0.2 -0.4 -0.2 -0.0 -0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 -0.4 +0.2 +0.1 -0.1
carbon source Fumarate (C) +0.3 -0.2 +0.0 -0.2 -0.2
carbon source L-Malic (C) +0.2 -0.3 +0.2 -0.1 -0.2
carbon source Ying_all64 rep B; time point 3 +0.1 +0.2 -0.0 -0.3 -0.2
carbon source D-Maltose (C) +0.1 -0.2 -0.1 +0.4 -0.2
carbon source pyruvate (C) +0.1 -0.5 +0.3 +0.1 +0.1
carbon source Ying_all64 rep A; time point 2 +0.1 +0.4 -0.2 -0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 +0.5 -0.2 +0.0 -0.1
stress R2A with 2-pentyl-furan 10.6842 mM +0.0 +0.4 -0.2 +0.0 -0.1
carbon source L-Asparagine (C) -0.0 -0.6 +0.2 +0.3 +0.3
carbon source D-Glucose-6-Phosphate (C) +0.0 -0.0 +0.3 +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 +0.5 +0.0 -0.1 +0.1
carbon source acetate (C) -0.1 -0.3 +0.1 +0.3 +0.3
stress R2A with 2-pentyl-furan 32.0526 mM -0.1 +0.4 -0.1 -0.1 +0.3
stress R2A with 3-octanone 5.31033333333333 mM +0.2 +0.3 -0.2 -0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.6 -0.1 +0.0 -0.2
stress R2A with 3-octanone 2.65516666666667 mM -0.1 +0.4 +0.1 -0.1 +0.3
carbon source Glucuronamide (C) +0.2 +0.7 -0.0 -0.2 -0.1
stress R2A with 3-octanone 1.77016666666667 mM +0.1 +0.5 +0.0 -0.1 +0.2
carbon source D-Cellobiose (C) -0.1 -0.5 +0.4 +0.3 +0.7
carbon source casaminos (C) +0.0 -0.2 +0.3 +0.3 +0.4
stress R2A with 3-octanone 1.77016666666667 mM -0.0 +0.8 -0.0 -0.0 +0.2
stress R2A with 3-octanone 5.31033333333333 mM +0.2 +0.4 +0.1 +0.1 +0.2
carbon source D-Galactose (C) -0.0 +0.1 +0.3 +0.6 +0.2
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