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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12345 and ABIE51_RS12350 are separated by 74 nucleotides
ABIE51_RS12350 and ABIE51_RS12355 are separated by 12 nucleotides
ABIE51_RS12355 and ABIE51_RS12360 are separated by 24 nucleotides
ABIE51_RS12360 and ABIE51_RS12365 are separated by 226 nucleotides
ABIE51_RS12345: ABIE51_RS12345 - helix-turn-helix transcriptional regulator, at 2,663,572 to 2,663,835
_RS12345
ABIE51_RS12350: ABIE51_RS12350 - hypothetical protein, at 2,663,910 to 2,665,031
_RS12350
ABIE51_RS12355: ABIE51_RS12355 - PIN domain-containing protein, at 2,665,044 to 2,665,574
_RS12355
ABIE51_RS12360: ABIE51_RS12360 - hypothetical protein, at 2,665,599 to 2,666,351
_RS12360
ABIE51_RS12365: ABIE51_RS12365 - hypothetical protein, at 2,666,578 to 2,666,847
_RS12365
Group
Condition
ABIE51
_RS12345
ABIE51
_RS12350
ABIE51
_RS12355
ABIE51
_RS12360
ABIE51
_RS12365
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.2
-0.0
-0.0
-1.7
-0.6
carbon source
Ying_sugar7 rep A; time point 3
-0.4
-0.1
+0.0
-1.6
+0.0
carbon source
Ying_sugar7 rep B; time point 3
-0.5
-0.0
+0.0
-1.6
+0.2
carbon source
D-Galactose (C)
-0.1
+0.1
-0.0
-1.8
-0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
-0.1
-0.0
-1.4
-0.2
carbon source
Ying_sugar7 rep B; time point 2
+0.3
-0.1
+0.0
-1.7
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.1
-0.1
+0.1
-0.4
-0.9
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
-0.1
+0.0
-1.3
-0.2
carbon source
Ying_sugar7 rep A; time point 2
+0.3
-0.1
-0.0
-1.4
-0.1
carbon source
Ying_sugar7 rep C; time point 3
+0.0
-0.1
+0.1
-1.6
+0.2
carbon source
D-Glucose-6-Phosphate (C)
+0.0
-0.1
-0.1
-1.4
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
+0.1
+0.1
-1.6
+0.2
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.4
-0.1
-0.1
-1.4
-0.1
carbon source
D-Glucose-6-Phosphate (C)
-0.1
-0.1
-0.0
-1.4
+0.3
carbon source
D-Galactose (C)
+0.2
+0.1
+0.1
-2.0
+0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.0
+0.1
-1.3
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-0.1
+0.1
-1.3
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.1
+0.1
-1.2
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.3
-0.2
+0.0
-0.7
-0.6
carbon source
Ying_all64 rep A; time point 3
-0.5
+0.0
-0.1
-0.7
+0.3
carbon source
Ying_all64 rep B; time point 2
+0.3
-0.0
+0.0
-0.7
-0.5
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.4
-0.1
+0.0
-1.2
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
-0.1
+0.1
-1.2
+0.2
carbon source
pyruvate (C)
+0.3
+0.0
+0.1
-0.9
-0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.0
+0.2
-1.0
+0.3
carbon source
D-Maltose (C)
-0.2
+0.2
-0.0
-0.8
+0.5
carbon source
L-tyrosine (C)
-0.7
-0.2
-0.1
+0.1
+0.6
carbon source
Ying_all64 rep B; time point 3
-0.4
+0.1
+0.2
-0.5
+0.5
carbon source
D-Glucuronic Acid (C)
+0.2
-0.0
+0.0
-0.6
+0.7
carbon source
succinate (C)
+0.2
+0.1
+0.1
-0.5
+0.7
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ABIE51_RS12345
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ABIE51_RS12350
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ABIE51_RS12355
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ABIE51_RS12360
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