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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12275 and ABIE51_RS12280 are separated by 84 nucleotides
ABIE51_RS12280 and ABIE51_RS12285 are separated by 202 nucleotides
ABIE51_RS12285 and ABIE51_RS12290 are separated by 83 nucleotides
ABIE51_RS12290 and ABIE51_RS12295 are separated by 155 nucleotides
ABIE51_RS12275: ABIE51_RS12275 - gamma-glutamyl-gamma-aminobutyrate hydrolase family protein, at 2,649,987 to 2,650,754
_RS12275
ABIE51_RS12280: ABIE51_RS12280 - phasin family protein, at 2,650,839 to 2,651,417
_RS12280
ABIE51_RS12285: ABIE51_RS12285 - restriction endonuclease, at 2,651,620 to 2,652,597
_RS12285
ABIE51_RS12290: ABIE51_RS12290 - SDR family oxidoreductase, at 2,652,681 to 2,654,675
_RS12290
ABIE51_RS12295: ABIE51_RS12295 - acyl-CoA-binding protein, at 2,654,831 to 2,655,088
_RS12295
Group
Condition
ABIE51
_RS12275
ABIE51
_RS12280
ABIE51
_RS12285
ABIE51
_RS12290
ABIE51
_RS12295
carbon source
D-Glucuronic Acid (C)
+0.2
-1.7
-0.4
-0.0
-0.0
carbon source
Ying_all64 rep B; time point 3
-0.4
-0.7
-0.1
-0.1
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-1.3
+0.1
-0.0
+0.2
carbon source
Ying_Others16 rep B; time point 1
-0.1
-1.4
+0.2
-0.0
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-1.7
+0.2
-0.0
+0.5
carbon source
pyruvate (C)
+0.1
-1.3
-0.2
+0.0
+0.3
carbon source
Ying_sugar7 rep A; time point 1
-0.2
-1.1
-0.0
+0.0
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
-1.2
-0.2
-0.1
+0.4
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.3
-1.2
+0.1
-0.1
+0.5
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
-1.2
-0.0
-0.1
+0.4
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.3
-1.3
+0.4
-0.1
+0.5
carbon source
Ying_sugar7 rep B; time point 2
-0.2
-0.8
-0.2
+0.1
+0.4
carbon source
Ying_sugar7 rep A; time point 3
-0.4
-1.2
+0.3
+0.0
+0.4
carbon source
Ying_all64 rep A; time point 3
-0.2
-1.0
+0.2
-0.0
+0.2
carbon source
Ying_sugar7 rep C; time point 3
-0.4
-0.7
-0.1
+0.0
+0.3
carbon source
Ying_sugar7 rep C; time point 1
-0.3
-0.8
+0.1
+0.1
+0.2
carbon source
Ying_sugar7 rep B; time point 3
-0.4
-1.0
+0.2
-0.0
+0.5
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
-1.2
+0.0
-0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.3
-0.5
-0.4
+0.0
+0.0
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.0
-0.7
-0.0
-0.1
+0.4
carbon source
Ying_all64 rep C; time point 3
-0.2
-0.6
+0.1
-0.0
+0.2
carbon source
Ying_sugar7 rep C; time point 2
-0.2
-0.6
-0.0
-0.0
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.3
-0.5
-0.1
-0.3
carbon source
Ying_sugar7 rep A; time point 2
-0.3
-0.7
+0.1
+0.0
+0.4
carbon source
D-Maltose (C)
+0.2
-0.5
-0.2
+0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
+0.4
+0.1
+0.0
-0.3
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
+0.7
-0.1
-0.1
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.8
-0.2
+0.0
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
+0.5
-0.2
+0.0
+0.3
carbon source
Glucuronamide (C)
+0.1
+0.8
+0.0
+0.1
+0.1
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