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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12260 and ABIE51_RS12265 are separated by 710 nucleotides
ABIE51_RS12265 and ABIE51_RS12270 are separated by 354 nucleotides
ABIE51_RS12270 and ABIE51_RS12275 are separated by 49 nucleotides
ABIE51_RS12275 and ABIE51_RS12280 are separated by 84 nucleotides
ABIE51_RS12260: ABIE51_RS12260 - amidohydrolase family protein, at 2,644,509 to 2,645,897
_RS12260
ABIE51_RS12265: ABIE51_RS12265 - DEAD/DEAH box helicase, at 2,646,608 to 2,648,716
_RS12265
ABIE51_RS12270: ABIE51_RS12270 - EamA family transporter, at 2,649,071 to 2,649,937
_RS12270
ABIE51_RS12275: ABIE51_RS12275 - gamma-glutamyl-gamma-aminobutyrate hydrolase family protein, at 2,649,987 to 2,650,754
_RS12275
ABIE51_RS12280: ABIE51_RS12280 - phasin family protein, at 2,650,839 to 2,651,417
_RS12280
Group
Condition
ABIE51
_RS12260
ABIE51
_RS12265
ABIE51
_RS12270
ABIE51
_RS12275
ABIE51
_RS12280
carbon source
Ying_sugar7 rep A; time point 3
-0.2
-0.1
-0.0
-0.4
-1.2
carbon source
D-Glucuronic Acid (C)
-0.1
-0.2
-0.0
+0.2
-1.7
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
-0.1
-0.3
-0.1
-1.3
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-0.1
-0.0
-0.4
-1.0
carbon source
Ying_Others16 rep B; time point 1
-0.0
-0.1
-0.0
-0.1
-1.4
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
+0.1
-0.1
-0.1
-1.7
carbon source
Ying_sugar7 rep C; time point 3
-0.2
-0.2
-0.1
-0.4
-0.7
carbon source
Ying_sugar7 rep A; time point 1
-0.0
-0.1
+0.0
-0.2
-1.1
carbon source
Ying_sugar7 rep B; time point 2
-0.2
-0.1
-0.1
-0.2
-0.8
carbon source
Ying_sugar7 rep C; time point 1
-0.1
-0.1
-0.1
-0.3
-0.8
carbon source
Ying_sugar7 rep A; time point 2
-0.1
-0.2
-0.1
-0.3
-0.7
carbon source
Ying_sugar7 rep C; time point 2
-0.2
-0.2
-0.2
-0.2
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.0
-0.3
-0.1
-0.1
-0.7
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.0
+0.2
+0.0
-0.3
-1.2
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
+0.2
+0.1
-0.3
-1.3
carbon source
L-Glutamine (C)
-0.2
-0.1
-0.1
-0.2
-0.6
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.0
-0.3
-0.0
-0.1
-0.7
carbon source
pyruvate (C)
+0.1
-0.1
+0.1
+0.1
-1.3
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.2
-0.2
+0.0
-0.6
carbon source
Ying_all64 rep B; time point 3
+0.1
-0.0
+0.0
-0.4
-0.7
carbon source
Ying_all64 rep A; time point 3
+0.1
+0.0
+0.1
-0.2
-1.0
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
+0.1
-0.1
+0.1
-1.2
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+0.1
+0.0
+0.0
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
-0.3
-0.2
+0.3
-0.5
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.2
+0.0
+0.1
-1.2
dmso control
DMSO control
-0.1
-0.3
-0.2
+0.1
+0.5
dmso control
DMSO control
+0.0
-0.4
-0.2
+0.1
+0.5
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.3
-0.1
-0.1
+0.0
+0.7
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
-0.0
-0.3
+0.1
+0.7
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.0
+0.1
-0.1
+0.2
+0.8
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ABIE51_RS12270
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