Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS12260 and ABIE51_RS12265 are separated by 710 nucleotidesABIE51_RS12265 and ABIE51_RS12270 are separated by 354 nucleotidesABIE51_RS12270 and ABIE51_RS12275 are separated by 49 nucleotidesABIE51_RS12275 and ABIE51_RS12280 are separated by 84 nucleotides ABIE51_RS12260: ABIE51_RS12260 - amidohydrolase family protein, at 2,644,509 to 2,645,897 _RS12260 ABIE51_RS12265: ABIE51_RS12265 - DEAD/DEAH box helicase, at 2,646,608 to 2,648,716 _RS12265 ABIE51_RS12270: ABIE51_RS12270 - EamA family transporter, at 2,649,071 to 2,649,937 _RS12270 ABIE51_RS12275: ABIE51_RS12275 - gamma-glutamyl-gamma-aminobutyrate hydrolase family protein, at 2,649,987 to 2,650,754 _RS12275 ABIE51_RS12280: ABIE51_RS12280 - phasin family protein, at 2,650,839 to 2,651,417 _RS12280
Group Condition ABIE51_RS12260 ABIE51_RS12265 ABIE51_RS12270 ABIE51_RS12275 ABIE51_RS12280
carbon source Ying_sugar7 rep A; time point 3 -0.2 -0.1 -0.0 -0.4 -1.2
carbon source D-Glucuronic Acid (C) -0.1 -0.2 -0.0 +0.2 -1.7
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 -0.1 -0.3 -0.1 -1.3
carbon source Ying_sugar7 rep B; time point 3 -0.2 -0.1 -0.0 -0.4 -1.0
carbon source Ying_Others16 rep B; time point 1 -0.0 -0.1 -0.0 -0.1 -1.4
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 +0.1 -0.1 -0.1 -1.7
carbon source Ying_sugar7 rep C; time point 3 -0.2 -0.2 -0.1 -0.4 -0.7
carbon source Ying_sugar7 rep A; time point 1 -0.0 -0.1 +0.0 -0.2 -1.1
carbon source Ying_sugar7 rep B; time point 2 -0.2 -0.1 -0.1 -0.2 -0.8
carbon source Ying_sugar7 rep C; time point 1 -0.1 -0.1 -0.1 -0.3 -0.8
carbon source Ying_sugar7 rep A; time point 2 -0.1 -0.2 -0.1 -0.3 -0.7
carbon source Ying_sugar7 rep C; time point 2 -0.2 -0.2 -0.2 -0.2 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.0 -0.3 -0.1 -0.1 -0.7
carbon source Ying_AminoAcid20 rep B; time point 3 +0.0 +0.2 +0.0 -0.3 -1.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 +0.2 +0.1 -0.3 -1.3
carbon source L-Glutamine (C) -0.2 -0.1 -0.1 -0.2 -0.6
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.0 -0.3 -0.0 -0.1 -0.7
carbon source pyruvate (C) +0.1 -0.1 +0.1 +0.1 -1.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 -0.2 -0.2 +0.0 -0.6
carbon source Ying_all64 rep B; time point 3 +0.1 -0.0 +0.0 -0.4 -0.7
carbon source Ying_all64 rep A; time point 3 +0.1 +0.0 +0.1 -0.2 -1.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 +0.1 -0.1 +0.1 -1.2
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 +0.1 +0.0 +0.0 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.1 -0.3 -0.2 +0.3 -0.5
carbon source Ying_AminoAcid20 rep C; time point 2 +0.1 +0.2 +0.0 +0.1 -1.2
dmso control DMSO control -0.1 -0.3 -0.2 +0.1 +0.5
dmso control DMSO control +0.0 -0.4 -0.2 +0.1 +0.5
stress R2A with 2-pentyl-furan 32.0526 mM -0.3 -0.1 -0.1 +0.0 +0.7
stress R2A with 2-pentyl-furan 21.3684 mM -0.2 -0.0 -0.3 +0.1 +0.7
stress R2A with 1-octen-3-ol 0.904549 mM -0.0 +0.1 -0.1 +0.2 +0.8
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