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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS12150 and ABIE51_RS12155 are separated by 190 nucleotides
ABIE51_RS12155 and ABIE51_RS12160 are separated by 190 nucleotides
ABIE51_RS12160 and ABIE51_RS12165 overlap by 32 nucleotides
ABIE51_RS12165 and ABIE51_RS12170 are separated by 84 nucleotides
ABIE51_RS12150: ABIE51_RS12150 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 2,622,063 to 2,623,148
_RS12150
ABIE51_RS12155: ABIE51_RS12155 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 2,623,339 to 2,624,307
_RS12155
ABIE51_RS12160: ABIE51_RS12160 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 2,624,498 to 2,625,142
_RS12160
ABIE51_RS12165: ABIE51_RS12165 - FHA domain-containing protein, at 2,625,111 to 2,625,905
_RS12165
ABIE51_RS12170: ABIE51_RS12170 - polyhydroxyalkanoic acid system family protein, at 2,625,990 to 2,626,265
_RS12170
Group
Condition
ABIE51
_RS12150
ABIE51
_RS12155
ABIE51
_RS12160
ABIE51
_RS12165
ABIE51
_RS12170
carbon source
Ying_sugar7 rep B; time point 2
-6.9
-0.6
-0.4
N.D.
+0.0
carbon source
Ying_sugar7 rep C; time point 2
-6.9
-0.5
-0.3
N.D.
-0.1
carbon source
Ying_sugar7 rep A; time point 2
-6.9
-0.6
-0.3
N.D.
+0.2
carbon source
Ying_sugar7 rep B; time point 3
-6.4
-0.7
-0.3
N.D.
+0.2
carbon source
Ying_sugar7 rep A; time point 3
-6.6
-0.7
-0.2
N.D.
+0.4
carbon source
Ying_sugar7 rep C; time point 3
-6.6
-0.7
-0.2
N.D.
+0.5
carbon source
Ying_sugar7 rep A; time point 1
-3.7
-0.3
-0.2
N.D.
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
-3.7
-0.3
-0.1
N.D.
-0.2
carbon source
Ying_sugar7 rep C; time point 1
-3.6
-0.4
-0.2
N.D.
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
-3.1
-0.2
-0.1
N.D.
-0.4
carbon source
Ying_OrganicAcid7 rep C; time point 2
-3.2
-0.1
-0.2
N.D.
+0.3
carbon source
D-Glucose-6-Phosphate (C)
-2.7
+0.0
-0.1
N.D.
+0.1
carbon source
D-Galactose (C)
-2.4
-0.1
-0.2
N.D.
+0.2
carbon source
D-Galactose (C)
-2.6
+0.0
+0.0
N.D.
+0.0
carbon source
D-Maltose (C)
-1.0
+0.1
-0.0
N.D.
-0.8
carbon source
Fumarate (C)
-0.3
-0.3
-0.1
N.D.
-0.8
carbon source
D-Glucose-6-Phosphate (C)
-1.8
-0.2
-0.0
N.D.
+0.4
carbon source
Ying_OrganicAcid7 rep C; time point 1
-1.4
-0.2
-0.0
N.D.
+0.1
carbon source
pyruvate (C)
-1.1
-0.1
-0.2
N.D.
-0.0
carbon source
Ying_OrganicAcid7 rep A; time point 1
-1.1
-0.1
-0.1
N.D.
+0.1
carbon source
D-Maltose (C)
-1.5
-0.0
-0.0
N.D.
+0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
-1.0
-0.0
-0.2
N.D.
-0.0
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.5
-0.2
-0.1
N.D.
-0.2
carbon source
acetate (C)
-1.0
+0.0
+0.0
N.D.
+0.4
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
-0.3
-0.2
N.D.
-0.3
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.3
-0.2
-0.2
N.D.
-0.2
carbon source
Ying_all64 rep C; time point 3
-0.5
-0.0
-0.0
N.D.
+0.5
carbon source
D-Cellobiose (C)
-0.4
+0.1
+0.1
N.D.
+0.6
carbon source
Ying_all64 rep B; time point 3
-0.3
-0.0
+0.0
N.D.
+0.7
carbon source
L-Glutamine (C)
+0.1
-0.1
+0.0
N.D.
+0.8
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