Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS11910 and ABIE51_RS11915 are separated by 121 nucleotidesABIE51_RS11915 and ABIE51_RS11920 are separated by 2 nucleotidesABIE51_RS11920 and ABIE51_RS11925 overlap by 4 nucleotidesABIE51_RS11925 and ABIE51_RS11930 overlap by 4 nucleotides ABIE51_RS11910: ABIE51_RS11910 - alpha/beta hydrolase, at 2,573,904 to 2,574,845 _RS11910 ABIE51_RS11915: ABIE51_RS11915 - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 2,574,967 to 2,576,985 _RS11915 ABIE51_RS11920: ABIE51_RS11920 - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 2,576,988 to 2,578,739 _RS11920 ABIE51_RS11925: ABIE51_RS11925 - poly-beta-1,6-N-acetyl-D-glucosamine synthase, at 2,578,736 to 2,579,992 _RS11925 ABIE51_RS11930: ABIE51_RS11930 - hypothetical protein, at 2,579,989 to 2,580,513 _RS11930
Group Condition ABIE51_RS11910 ABIE51_RS11915 ABIE51_RS11920 ABIE51_RS11925 ABIE51_RS11930
carbon source succinate (C) -0.5 -0.1 -0.0 -0.1 -0.3
carbon source L-tyrosine (C) -0.5 +0.1 -0.2 -0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 -0.4 -0.4 -0.2 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 -0.2 -0.4 -0.2 +0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 -0.2 -0.1 -0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 -0.2 -0.4 -0.1 -0.2
carbon source D-Glucose-6-Phosphate (C) -0.4 -0.1 -0.4 +0.0 +0.2
carbon source pyruvate (C) -0.4 +0.1 -0.2 +0.1 -0.2
r2a no stress control R2A no stress control -0.2 +0.1 -0.3 -0.2 -0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.0 -0.3 -0.4 -0.0 +0.2
carbon source Ying_Others16 rep B; time point 1 -0.7 -0.0 -0.2 +0.1 +0.3
carbon source D-Cellobiose (C) -0.5 +0.4 -0.7 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.3 -0.2 -0.2 -0.1 +0.4
dmso control DMSO control +0.2 -0.2 -0.0 -0.2 -0.2
carbon source Fumarate (C) -0.4 -0.2 -0.5 +0.2 +0.4
carbon source L-Tryptophan (C) -0.3 +0.4 -0.1 +0.0 -0.3
carbon source D-Maltose (C) +0.1 -0.0 -0.4 +0.3 -0.2
stress R2A with 3-octanone 1.77016666666667 mM -0.2 -0.3 -0.1 +0.0 +0.2
carbon source L-Malic (C) -0.2 +0.1 -0.4 -0.1 +0.3
carbon source D-Glucuronic Acid (C) +0.0 -0.2 -0.6 +0.3 +0.2
carbon source Fumarate (C) -0.6 +0.1 +0.1 +0.3 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.0 -0.0 -0.4 +0.1 +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 +0.2 +0.1 -0.4 -0.1 +0.2
carbon source Ying_Others16 rep C; time point 1 -0.2 -0.1 -0.1 -0.2 +0.4
carbon source Ying_AminoAcid20 rep C; time point 2 -0.3 +0.0 -0.2 +0.1 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.0 -0.2 -0.3 +0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 -0.1 -0.2 -0.1 +0.4
carbon source pyruvate (C) +0.1 +0.0 -0.5 +0.3 +0.3
carbon source Glucuronamide (C) +0.5 +0.2 -0.2 -0.2 +0.1
carbon source L-Asparagine (C) +0.1 -0.0 +0.1 +0.4 +0.6
remove
ABIE51_RS11910
plot		 remove
ABIE51_RS11915
plot		 remove
ABIE51_RS11920		 remove
ABIE51_RS11925
plot		 remove
ABIE51_RS11930
plot