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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS11400 and ABIE51_RS11405 are separated by 85 nucleotides
ABIE51_RS11405 and ABIE51_RS11410 are separated by 73 nucleotides
ABIE51_RS11410 and ABIE51_RS11415 are separated by 199 nucleotides
ABIE51_RS11415 and ABIE51_RS11420 are separated by 91 nucleotides
ABIE51_RS11400: ABIE51_RS11400 - tetratricopeptide repeat protein, at 2,464,152 to 2,465,228
_RS11400
ABIE51_RS11405: ABIE51_RS11405 - TIGR04325 family methyltransferase, at 2,465,314 to 2,466,126
_RS11405
ABIE51_RS11410: ABIE51_RS11410 - DUF4136 domain-containing protein, at 2,466,200 to 2,466,748
_RS11410
ABIE51_RS11415: ABIE51_RS11415 - transporter, at 2,466,948 to 2,468,387
_RS11415
ABIE51_RS11420: ABIE51_RS11420 - hypothetical protein, at 2,468,479 to 2,468,988
_RS11420
Group
Condition
ABIE51
_RS11400
ABIE51
_RS11405
ABIE51
_RS11410
ABIE51
_RS11415
ABIE51
_RS11420
stress
R2A with 3-octanone 5.31033333333333 mM
-0.2
-0.3
-0.5
-0.4
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.1
-0.3
-0.4
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-0.3
-0.2
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.1
-0.1
-0.3
-0.1
N.D.
r2a no stress control
R2A no stress control
-0.1
-0.2
-0.2
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.2
-0.2
-0.0
N.D.
carbon source
Ying_all64 rep B; time point 3
-0.1
-0.1
-0.1
-0.1
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.0
-0.0
-0.3
-0.2
N.D.
carbon source
L-Malic (C)
-0.0
-0.3
-0.1
-0.0
N.D.
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.0
-0.1
-0.3
-0.1
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.2
-0.1
+0.1
-0.2
N.D.
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.1
-0.2
+0.0
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
+0.1
-0.3
-0.0
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.2
+0.3
+0.2
N.D.
stress
R2A with 3-octanone 1.77016666666667 mM
+0.2
-0.1
-0.0
+0.1
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.3
-0.1
+0.0
+0.1
N.D.
carbon source
pyruvate (C)
+0.0
+0.3
-0.1
+0.2
N.D.
carbon source
D-Cellobiose (C)
+0.1
+0.1
-0.1
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.0
+0.2
+0.3
+0.0
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.2
-0.1
+0.3
+0.0
N.D.
dmso control
DMSO control
+0.1
+0.2
-0.0
+0.2
N.D.
carbon source
Ying_sugar7 rep C; time point 2
+0.0
+0.2
+0.2
+0.1
N.D.
carbon source
succinate (C)
+0.0
+0.1
+0.1
+0.3
N.D.
carbon source
Glucuronamide (C)
-0.0
+0.1
+0.2
+0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.2
-0.0
+0.1
N.D.
carbon source
Ying_Others16 rep C; time point 1
+0.0
+0.2
+0.2
-0.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.0
+0.2
+0.2
+0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
+0.2
+0.2
-0.0
N.D.
carbon source
Fumarate (C)
+0.2
-0.1
+0.3
+0.2
N.D.
carbon source
Fumarate (C)
+0.0
+0.2
+0.3
+0.3
N.D.
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