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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS11385 and ABIE51_RS11390 are separated by 1172 nucleotides
ABIE51_RS11390 and ABIE51_RS11395 are separated by 21 nucleotides
ABIE51_RS11395 and ABIE51_RS11400 are separated by 137 nucleotides
ABIE51_RS11400 and ABIE51_RS11405 are separated by 85 nucleotides
ABIE51_RS11385: ABIE51_RS11385 - M56 family metallopeptidase, at 2,459,099 to 2,460,886
_RS11385
ABIE51_RS11390: ABIE51_RS11390 - FAD-dependent oxidoreductase, at 2,462,059 to 2,463,726
_RS11390
ABIE51_RS11395: ABIE51_RS11395 - DksA/TraR family C4-type zinc finger protein, at 2,463,748 to 2,464,014
_RS11395
ABIE51_RS11400: ABIE51_RS11400 - tetratricopeptide repeat protein, at 2,464,152 to 2,465,228
_RS11400
ABIE51_RS11405: ABIE51_RS11405 - TIGR04325 family methyltransferase, at 2,465,314 to 2,466,126
_RS11405
Group
Condition
ABIE51
_RS11385
ABIE51
_RS11390
ABIE51
_RS11395
ABIE51
_RS11400
ABIE51
_RS11405
carbon source
succinate (C)
-0.2
-0.1
-5.3
+0.0
+0.1
stress
R2A with 3-octanone 5.31033333333333 mM
-0.2
-0.3
-0.3
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.1
-0.1
-0.7
-0.1
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.2
-0.2
-0.5
-0.1
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.1
-0.0
-0.8
-0.0
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.2
-0.1
-0.7
+0.0
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.0
-0.0
-0.9
+0.0
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.0
+0.1
-0.9
-0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.0
+0.0
-0.7
-0.0
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
+0.1
-0.7
-0.0
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.1
+0.1
-0.7
+0.1
-0.1
carbon source
L-Glutamine (C)
+0.1
+0.1
-0.9
+0.2
+0.0
dmso control
DMSO control
+0.1
-0.1
-0.6
+0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.1
-0.7
+0.2
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
+0.1
-0.8
+0.0
+0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.0
-0.2
+0.4
-0.2
-0.3
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.3
-0.3
-0.1
-0.2
carbon source
D-Maltose (C)
+0.2
+0.3
-0.7
-0.1
+0.1
carbon source
L-Malic (C)
+0.2
+0.3
-0.2
-0.0
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.1
-0.5
+0.2
+0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.2
+0.6
-0.1
-0.2
r2a no stress control
R2A no stress control
+0.2
+0.1
-0.5
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.1
-0.3
+0.2
+0.2
carbon source
Ying_all64 rep B; time point 2
-0.2
+0.1
+0.4
-0.1
+0.1
r2a no stress control
R2A no stress control
+0.2
+0.2
-0.2
+0.2
+0.2
carbon source
D-Glucuronic Acid (C)
+0.2
-0.2
+0.6
-0.1
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
-0.1
+0.8
-0.1
-0.0
carbon source
Ying_Others16 rep C; time point 1
+0.2
+0.2
+0.3
+0.0
+0.2
carbon source
D-Glucose-6-Phosphate (C)
-0.0
+0.2
+0.7
+0.1
+0.0
carbon source
Fumarate (C)
+0.3
+0.1
+0.4
+0.0
+0.2
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