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Protein
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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS11235 and ABIE51_RS11240 are separated by 526 nucleotides
ABIE51_RS11240 and ABIE51_RS11245 are separated by 51 nucleotides
ABIE51_RS11245 and ABIE51_RS11250 are separated by 53 nucleotides
ABIE51_RS11250 and ABIE51_RS11255 overlap by 1 nucleotides
ABIE51_RS11235: ABIE51_RS11235 - TIGR03862 family flavoprotein, at 2,436,199 to 2,437,446
_RS11235
ABIE51_RS11240: ABIE51_RS11240 - hypothetical protein, at 2,437,973 to 2,438,641
_RS11240
ABIE51_RS11245: ABIE51_RS11245 - sulfurtransferase, at 2,438,693 to 2,439,433
_RS11245
ABIE51_RS11250: ABIE51_RS11250 - DUF998 domain-containing protein, at 2,439,487 to 2,440,140
_RS11250
ABIE51_RS11255: ABIE51_RS11255 - DUF1993 domain-containing protein, at 2,440,140 to 2,440,649
_RS11255
Group
Condition
ABIE51
_RS11235
ABIE51
_RS11240
ABIE51
_RS11245
ABIE51
_RS11250
ABIE51
_RS11255
carbon source
Ying_sugar7 rep B; time point 3
-0.1
-0.3
-0.2
-0.1
-0.5
carbon source
Glucuronamide (C)
-0.0
-0.2
-0.0
-0.1
-0.7
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.0
+0.0
-0.3
-0.2
-0.4
carbon source
D-Galactose (C)
+0.0
-0.8
-0.1
+0.0
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.0
-0.3
-0.3
-0.1
-0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.1
-0.2
+0.0
-0.3
carbon source
L-Tryptophan (C)
+0.1
-0.3
-0.4
-0.2
+0.0
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
+0.3
-0.0
-0.3
-0.5
carbon source
Ying_all64 rep B; time point 3
-0.0
-0.2
-0.0
+0.2
-0.4
carbon source
L-tyrosine (C)
+0.2
-0.4
-0.1
-0.5
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.0
+0.2
-0.4
-0.1
carbon source
Fumarate (C)
+0.0
-0.0
-0.6
-0.1
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
+0.2
-0.3
-0.1
-0.3
carbon source
D-Cellobiose (C)
+0.1
+0.3
-0.3
-0.1
-0.3
carbon source
2-Deoxy-D-Ribose (C)
+0.2
+0.2
-0.3
-0.4
-0.1
carbon source
succinate (C)
-0.1
+0.4
-0.2
-0.1
-0.2
carbon source
casaminos (C)
-0.1
+0.1
-0.3
+0.2
-0.1
stress
R2A with 3-octanone 5.31033333333333 mM
-0.2
+0.3
-0.0
-0.1
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
+0.2
+0.1
-0.0
-0.4
carbon source
casaminos (C)
+0.1
+0.3
-0.3
-0.2
-0.2
stress
R2A with 3-octanone 1.77016666666667 mM
+0.0
+0.2
+0.1
+0.0
-0.5
carbon source
D-Glucuronic Acid (C)
-0.1
+0.4
-0.0
-0.2
-0.2
carbon source
Ying_all64 rep C; time point 1
-0.2
-0.1
+0.1
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
-0.0
-0.2
-0.2
+0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
+0.2
+0.2
+0.1
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.2
+0.3
+0.2
-0.1
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.2
+0.3
-0.3
-0.1
+0.2
carbon source
L-Malic (C)
+0.3
+0.0
+0.3
+0.1
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.4
-0.1
-0.1
+0.3
carbon source
Ying_Others16 rep A; time point 1
+0.1
+0.4
+0.2
-0.1
+0.4
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ABIE51_RS11245
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