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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS11215 and ABIE51_RS11220 are separated by 120 nucleotides
ABIE51_RS11220 and ABIE51_RS11225 are separated by 137 nucleotides
ABIE51_RS11225 and ABIE51_RS11230 are separated by 55 nucleotides
ABIE51_RS11230 and ABIE51_RS11235 are separated by 145 nucleotides
ABIE51_RS11215: ABIE51_RS11215 - LLM class flavin-dependent oxidoreductase, at 2,431,497 to 2,432,486
_RS11215
ABIE51_RS11220: ABIE51_RS11220 - hypothetical protein, at 2,432,607 to 2,433,095
_RS11220
ABIE51_RS11225: ABIE51_RS11225 - chromate efflux transporter, at 2,433,233 to 2,434,393
_RS11225
ABIE51_RS11230: ABIE51_RS11230 - serine hydrolase, at 2,434,449 to 2,436,053
_RS11230
ABIE51_RS11235: ABIE51_RS11235 - TIGR03862 family flavoprotein, at 2,436,199 to 2,437,446
_RS11235
Group
Condition
ABIE51
_RS11215
ABIE51
_RS11220
ABIE51
_RS11225
ABIE51
_RS11230
ABIE51
_RS11235
carbon source
L-Asparagine (C)
-0.3
-0.4
-0.6
+0.1
-0.0
carbon source
Glucuronamide (C)
-0.5
-0.3
-0.5
+0.2
-0.0
carbon source
Fumarate (C)
-0.4
-0.5
-0.1
+0.1
+0.0
carbon source
D-Maltose (C)
-0.1
-0.3
-0.3
-0.1
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
-0.2
+0.1
+0.1
-0.2
carbon source
casaminos (C)
-0.2
-0.2
-0.3
+0.0
+0.1
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-0.1
-0.4
-0.0
+0.2
carbon source
L-Glutamine (C)
+0.1
-0.3
-0.4
-0.0
+0.0
carbon source
Ying_sugar7 rep B; time point 2
-0.1
-0.2
+0.2
-0.1
-0.2
carbon source
L-Malic (C)
-0.3
+0.0
-0.4
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
-0.5
-0.1
+0.1
+0.1
carbon source
D-Glucuronic Acid (C)
+0.2
-0.2
-0.5
+0.1
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.5
+0.0
+0.0
-0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.2
-0.3
+0.0
+0.1
+0.2
carbon source
D-Cellobiose (C)
-0.2
+0.2
-0.4
+0.0
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.5
+0.0
+0.1
+0.1
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-0.2
+0.1
+0.1
+0.2
carbon source
propionate (C)
-0.2
-0.0
-0.3
+0.0
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-0.3
+0.1
+0.1
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.1
-0.4
+0.2
-0.1
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.2
+0.2
+0.0
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.1
+0.1
+0.1
+0.2
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.1
-0.2
-0.1
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.0
-0.2
+0.1
+0.3
carbon source
Ying_all64 rep A; time point 3
+0.3
-0.3
-0.1
+0.0
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.3
-0.1
+0.2
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
+0.1
+0.1
+0.2
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
+0.1
+0.2
+0.1
+0.1
carbon source
Fumarate (C)
+0.1
+0.4
-0.2
+0.1
+0.0
r2a no stress control
R2A no stress control
+0.2
-0.1
+0.1
+0.2
+0.2
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ABIE51_RS11225
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