Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS11175 and ABIE51_RS11180 are separated by 2 nucleotidesABIE51_RS11180 and ABIE51_RS11185 are separated by 139 nucleotidesABIE51_RS11185 and ABIE51_RS11190 are separated by 1 nucleotidesABIE51_RS11190 and ABIE51_RS11195 are separated by 137 nucleotides ABIE51_RS11175: ABIE51_RS11175 - porin, at 2,426,859 to 2,427,941 _RS11175 ABIE51_RS11180: ABIE51_RS11180 - DUF4124 domain-containing protein, at 2,427,944 to 2,428,318 _RS11180 ABIE51_RS11185: ABIE51_RS11185 - hypothetical protein, at 2,428,458 to 2,428,778 _RS11185 ABIE51_RS11190: ABIE51_RS11190 - phage baseplate assembly protein V, at 2,428,780 to 2,429,307 _RS11190 ABIE51_RS11195: ABIE51_RS11195 - metalloregulator ArsR/SmtB family transcription factor, at 2,429,445 to 2,429,846 _RS11195
Group Condition ABIE51_RS11175 ABIE51_RS11180 ABIE51_RS11185 ABIE51_RS11190 ABIE51_RS11195
carbon source Ying_all64 rep B; time point 3 -0.5 +0.2 -1.9 -0.2 -0.2
carbon source L-Malic (C) -0.6 -0.5 -0.0 +0.2 -0.6
carbon source Ying_all64 rep A; time point 3 -0.5 +0.2 -1.2 +0.2 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -0.4 +0.4 -1.2 -0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -0.5 +0.2 -0.5 -0.1 -0.5
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 +0.4 -1.3 +0.2 -0.2
carbon source Ying_sugar7 rep A; time point 3 -0.2 +0.3 -0.6 +0.1 -0.5
carbon source L-Glutamine (C) -0.7 -0.5 +0.6 +0.3 -0.5
carbon source L-Asparagine (C) -0.1 -0.2 +1.0 -1.0 -0.5
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.5 -1.0 +0.2 -0.2
carbon source D-Maltose (C) -0.1 -0.8 +0.6 -0.3 -0.0
stress R2A with 3-octanone 1.77016666666667 mM +0.6 -0.0 -1.1 -0.2 +0.2
carbon source succinate (C) +0.3 -1.4 +0.6 -0.1 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.4 -0.5 +0.9 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.4 -0.3 +1.0 -0.2 -0.4
stress R2A with 2-pentyl-furan 32.0526 mM +0.3 -0.1 +0.4 -0.4 -0.4
r2a no stress control R2A no stress control -0.1 -0.2 +0.9 -0.4 -0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.5 -0.3 +0.6 -0.2 -0.3
carbon source Ying_Others16 rep A; time point 1 +0.1 -0.4 +0.7 -0.4 +0.2
stress R2A with 2-pentyl-furan 32.0526 mM +0.4 +0.1 +0.5 -0.2 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.4 -0.1 +0.7 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.1 +1.0 -0.3 -0.4
carbon source pyruvate (C) +0.2 -0.4 +1.0 -0.2 -0.2
carbon source Ying_Others16 rep B; time point 1 -0.3 -0.3 +0.3 +0.6 +0.3
carbon source D-Galactose (C) -0.3 -0.2 +1.2 -0.1 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.3 +0.3 +0.9 +0.3 -0.4
carbon source D-Cellobiose (C) +0.1 +0.3 +0.8 -0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 -0.1 +1.2 +0.2 -0.2
carbon source Fumarate (C) +0.9 -0.1 +0.8 +0.5 -0.6
carbon source L-tyrosine (C) +0.4 +0.2 +1.1 +0.0 +0.3
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