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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS11080 and ABIE51_RS11085 overlap by 4 nucleotides
ABIE51_RS11085 and ABIE51_RS11090 are separated by 153 nucleotides
ABIE51_RS11090 and ABIE51_RS11095 are separated by 71 nucleotides
ABIE51_RS11095 and ABIE51_RS11100 are separated by 108 nucleotides
ABIE51_RS11080: ABIE51_RS11080 - LysR family transcriptional regulator, at 2,405,866 to 2,406,909
_RS11080
ABIE51_RS11085: ABIE51_RS11085 - sigma factor-like helix-turn-helix DNA-binding protein, at 2,406,906 to 2,407,172
_RS11085
ABIE51_RS11090: ABIE51_RS11090 - cupin domain-containing protein, at 2,407,326 to 2,407,736
_RS11090
ABIE51_RS11095: ABIE51_RS11095 - RNA polymerase sigma-70 factor, at 2,407,808 to 2,408,704
_RS11095
ABIE51_RS11100: ABIE51_RS11100 - alpha/beta hydrolase, at 2,408,813 to 2,409,634
_RS11100
Group
Condition
ABIE51
_RS11080
ABIE51
_RS11085
ABIE51
_RS11090
ABIE51
_RS11095
ABIE51
_RS11100
carbon source
pyruvate (C)
-0.2
N.D.
-1.4
-0.1
-0.0
carbon source
D-Galactose (C)
-0.2
N.D.
-1.4
-0.2
+0.3
stress
R2A with 3-octanone 5.31033333333333 mM
-0.4
N.D.
-0.8
+0.0
-0.1
carbon source
Glucuronamide (C)
-1.1
N.D.
-0.3
+0.0
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-1.2
N.D.
+0.7
+0.1
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.3
N.D.
+0.2
-0.6
+0.3
carbon source
L-Glutamine (C)
+0.6
N.D.
-0.5
-0.1
+0.0
carbon source
D-Glucose-6-Phosphate (C)
-0.3
N.D.
+0.5
-0.2
+0.1
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.3
N.D.
+0.7
-0.2
+0.1
carbon source
Ying_all64 rep B; time point 2
+0.0
N.D.
+0.6
-0.4
+0.1
carbon source
propionate (C)
+0.3
N.D.
+0.2
-0.3
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.1
N.D.
+0.8
-0.2
+0.2
carbon source
D-Maltose (C)
+0.2
N.D.
+0.7
+0.0
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.3
N.D.
+0.5
+0.2
-0.2
carbon source
Ying_all64 rep C; time point 2
+0.1
N.D.
+0.7
-0.1
+0.1
carbon source
acetate (C)
+0.2
N.D.
+0.6
-0.1
+0.2
carbon source
Ying_Others16 rep B; time point 1
-0.2
N.D.
+1.0
+0.2
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
+0.5
+0.3
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.3
N.D.
+0.6
+0.0
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
N.D.
+0.3
+0.2
+0.4
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
+0.7
+0.3
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.5
N.D.
+0.2
+0.4
+0.2
carbon source
succinate (C)
+0.2
N.D.
+0.8
+0.2
+0.1
carbon source
L-tyrosine (C)
+0.8
N.D.
+0.1
+0.2
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
N.D.
+0.5
+0.3
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
N.D.
+0.5
+0.7
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.6
N.D.
+0.2
+0.6
+0.3
carbon source
L-Asparagine (C)
+0.7
N.D.
+0.9
+0.1
+0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.5
N.D.
+0.6
+0.4
+0.4
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.5
N.D.
+0.7
+0.3
+0.5
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