Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS10875 and ABIE51_RS10880 are separated by 25 nucleotidesABIE51_RS10880 and ABIE51_RS10885 are separated by 124 nucleotidesABIE51_RS10885 and ABIE51_RS10890 are separated by 288 nucleotidesABIE51_RS10890 and ABIE51_RS10895 are separated by 162 nucleotides ABIE51_RS10875: ABIE51_RS10875 - M23 family metallopeptidase, at 2,363,010 to 2,363,699 _RS10875 ABIE51_RS10880: ABIE51_RS10880 - L,D-transpeptidase, at 2,363,725 to 2,364,708 _RS10880 ABIE51_RS10885: ABIE51_RS10885 - MarC family NAAT transporter, at 2,364,833 to 2,365,501 _RS10885 ABIE51_RS10890: ABIE51_RS10890 - hypothetical protein, at 2,365,790 to 2,365,930 _RS10890 ABIE51_RS10895: ABIE51_RS10895 - glycoside hydrolase family 43 protein, at 2,366,093 to 2,367,106 _RS10895
Group Condition ABIE51_RS10875 ABIE51_RS10880 ABIE51_RS10885 ABIE51_RS10890 ABIE51_RS10895
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -0.6 +0.4 N.D. -0.2
carbon source Fumarate (C) -0.3 +0.6 -0.5 N.D. +0.0
carbon source Ying_sugar7 rep C; time point 3 +0.1 -0.5 +0.3 N.D. -0.1
carbon source Ying_all64 rep A; time point 3 +0.3 -0.5 +0.2 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.5 +0.1 +0.4 N.D. +0.0
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.3 +0.5 N.D. -0.2
stress R2A with 1-octen-3-ol 0.904549 mM +0.4 -0.4 +0.3 N.D. +0.0
dmso control DMSO control +0.4 -0.3 +0.2 N.D. +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 -0.1 +0.5 N.D. -0.2
stress R2A with 1-octen-3-ol 1.3568235 mM +0.2 -0.2 +0.5 N.D. +0.1
carbon source Ying_sugar7 rep A; time point 3 +0.2 -0.2 +0.7 N.D. -0.1
carbon source Ying_Others16 rep B; time point 1 +0.2 -0.1 +0.6 N.D. -0.1
stress R2A with 2-pentyl-furan 32.0526 mM +0.2 -0.2 +0.4 N.D. +0.3
carbon source D-Glucuronic Acid (C) +0.4 -1.1 +1.2 N.D. +0.2
carbon source L-tyrosine (C) +0.0 -0.1 +0.9 N.D. -0.1
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.4 -0.1 +0.4 N.D. +0.2
carbon source Ying_all64 rep A; time point 1 +0.2 +0.2 +0.7 N.D. -0.0
dmso control DMSO control +0.2 +0.3 +0.5 N.D. +0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM +0.3 +0.0 +0.6 N.D. +0.2
stress R2A with 1-octen-3-ol 1.3568235 mM +0.2 +0.2 +0.7 N.D. +0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM +0.5 +0.2 +0.4 N.D. +0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.4 +0.1 +0.7 N.D. -0.0
stress R2A with 2-pentyl-furan 21.3684 mM +0.5 +0.1 +0.5 N.D. +0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.4 +0.0 +0.6 N.D. +0.2
dmso control DMSO control +0.1 +0.2 +0.8 N.D. +0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM +0.5 +0.2 +0.4 N.D. +0.2
stress R2A with 2-pentyl-furan 21.3684 mM +0.6 +0.0 +0.5 N.D. +0.2
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.2 +0.5 +0.6 N.D. +0.1
r2a no stress control R2A no stress control +0.4 +0.3 +0.6 N.D. +0.1
stress R2A with 2-pentyl-furan 21.3684 mM +0.4 +0.2 +0.5 N.D. +0.4
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