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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS10565 and ABIE51_RS10570 are separated by 225 nucleotides
ABIE51_RS10570 and ABIE51_RS10575 are separated by 532 nucleotides
ABIE51_RS10575 and ABIE51_RS10580 are separated by 45 nucleotides
ABIE51_RS10580 and ABIE51_RS10585 are separated by 3 nucleotides
ABIE51_RS10565: ABIE51_RS10565 - hypothetical protein, at 2,291,645 to 2,297,878
_RS10565
ABIE51_RS10570: ABIE51_RS10570 - SMR family transporter, at 2,298,104 to 2,298,436
_RS10570
ABIE51_RS10575: ABIE51_RS10575 - hypothetical protein, at 2,298,969 to 2,299,118
_RS10575
ABIE51_RS10580: ABIE51_RS10580 - hypothetical protein, at 2,299,164 to 2,299,814
_RS10580
ABIE51_RS10585: ABIE51_RS10585 - hypothetical protein, at 2,299,818 to 2,300,078
_RS10585
Group
Condition
ABIE51
_RS10565
ABIE51
_RS10570
ABIE51
_RS10575
ABIE51
_RS10580
ABIE51
_RS10585
carbon source
L-tyrosine (C)
+0.0
-0.1
N.D.
-0.1
-1.2
carbon source
D-Glucuronic Acid (C)
-0.0
+0.3
N.D.
-0.1
-1.3
carbon source
Fumarate (C)
-0.1
-0.6
N.D.
-0.3
+0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.0
-0.1
N.D.
-0.1
-0.6
carbon source
acetate (C)
+0.2
-0.2
N.D.
+0.0
-0.8
carbon source
Ying_Others16 rep B; time point 1
-0.0
+0.0
N.D.
-0.3
-0.4
carbon source
succinate (C)
-0.1
-0.1
N.D.
+0.4
-1.0
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.4
N.D.
-0.1
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.0
-0.2
N.D.
+0.0
-0.5
carbon source
D-Cellobiose (C)
-0.0
-0.2
N.D.
+0.2
-0.6
stress
R2A with 3-octanone 2.65516666666667 mM
-0.0
-0.1
N.D.
-0.1
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.1
+0.0
N.D.
-0.0
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
-0.0
N.D.
+0.0
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.0
-0.3
N.D.
+0.1
-0.3
carbon source
Fumarate (C)
-0.2
+0.0
N.D.
+0.0
-0.4
carbon source
Ying_Others16 rep A; time point 1
+0.0
+0.0
N.D.
+0.1
-0.6
carbon source
propionate (C)
+0.1
-0.2
N.D.
+0.0
-0.3
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
+0.1
N.D.
-0.3
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.2
N.D.
-0.1
-0.4
carbon source
L-Tryptophan (C)
+0.1
+0.0
N.D.
+0.0
-0.5
carbon source
D-Maltose (C)
+0.0
-0.1
N.D.
+0.2
-0.4
carbon source
L-Asparagine (C)
+0.2
+0.1
N.D.
-0.2
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
+0.0
N.D.
+0.2
-0.3
stress
R2A with 3-octanone 5.31033333333333 mM
-0.0
+0.1
N.D.
+0.2
-0.3
carbon source
D-Galactose (C)
-0.1
+0.1
N.D.
+0.4
+0.1
carbon source
Ying_all64 rep B; time point 3
-0.0
+0.3
N.D.
+0.1
+0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.0
+0.3
N.D.
+0.2
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
+0.3
N.D.
+0.4
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.0
+0.4
N.D.
+0.2
+0.5
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.0
+0.3
N.D.
+0.5
+0.2
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