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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS10500 and ABIE51_RS10505 overlap by 4 nucleotides
ABIE51_RS10505 and ABIE51_RS10510 are separated by 198 nucleotides
ABIE51_RS10510 and ABIE51_RS10515 are separated by 103 nucleotides
ABIE51_RS10515 and ABIE51_RS10520 are separated by 73 nucleotides
ABIE51_RS10500: ABIE51_RS10500 - hypothetical protein, at 2,270,129 to 2,271,445
_RS10500
ABIE51_RS10505: ABIE51_RS10505 - MFS transporter, at 2,271,442 to 2,272,578
_RS10505
ABIE51_RS10510: ABIE51_RS10510 - autotransporter outer membrane beta-barrel domain-containing protein, at 2,272,777 to 2,278,896
_RS10510
ABIE51_RS10515: ABIE51_RS10515 - helix-turn-helix domain-containing protein, at 2,279,000 to 2,279,719
_RS10515
ABIE51_RS10520: ABIE51_RS10520 - MFS transporter, at 2,279,793 to 2,281,076
_RS10520
Group
Condition
ABIE51
_RS10500
ABIE51
_RS10505
ABIE51
_RS10510
ABIE51
_RS10515
ABIE51
_RS10520
carbon source
L-Glutamine (C)
-0.1
-0.3
-0.2
-0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.0
-0.4
-0.1
-0.4
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
-0.5
-0.1
-0.3
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
-0.5
-0.1
-0.3
+0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.2
-0.1
-0.3
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
-0.0
-0.2
-0.4
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
-0.3
-0.1
-0.4
-0.1
carbon source
L-Asparagine (C)
+0.0
-0.4
-0.0
-0.2
-0.2
carbon source
L-Malic (C)
-0.0
-0.3
+0.0
-0.2
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
-0.2
-0.1
-0.3
-0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.2
+0.0
-0.2
-0.3
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.1
-0.4
-0.1
-0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.1
-0.3
-0.1
-0.3
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.1
-0.3
-0.1
-0.4
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
+0.2
-0.1
-0.4
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
+0.3
-0.1
-0.6
-0.0
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
+0.2
+0.0
-0.3
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
+0.3
+0.1
-0.4
-0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.2
+0.3
-0.0
-0.1
-0.1
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.1
+0.2
-0.0
-0.3
+0.1
carbon source
Glucuronamide (C)
-0.1
+0.3
+0.1
+0.2
-0.3
carbon source
D-Glucuronic Acid (C)
-0.1
+0.6
-0.1
-0.0
-0.1
carbon source
pyruvate (C)
+0.1
+0.5
-0.0
-0.1
-0.2
carbon source
acetate (C)
+0.2
-0.1
-0.0
+0.4
-0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.1
+0.2
-0.0
+0.3
-0.2
carbon source
succinate (C)
+0.2
+0.4
+0.1
-0.0
-0.2
carbon source
D-Cellobiose (C)
-0.1
-0.0
-0.1
+1.0
-0.3
carbon source
D-Maltose (C)
+0.2
+0.6
+0.0
-0.0
-0.1
carbon source
Ying_Others16 rep B; time point 1
+0.0
+0.7
+0.0
+0.0
+0.0
carbon source
Fumarate (C)
+0.2
+0.5
-0.0
+0.3
-0.0
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