Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS10280 and ABIE51_RS10285 are separated by 143 nucleotidesABIE51_RS10285 and ABIE51_RS10290 are separated by 49 nucleotidesABIE51_RS10290 and ABIE51_RS10295 are separated by 189 nucleotidesABIE51_RS10295 and ABIE51_RS10300 are separated by 170 nucleotides ABIE51_RS10280: ABIE51_RS10280 - LysR substrate-binding domain-containing protein, at 2,218,213 to 2,219,130 _RS10280 ABIE51_RS10285: ABIE51_RS10285 - SDR family oxidoreductase, at 2,219,274 to 2,219,984 _RS10285 ABIE51_RS10290: ABIE51_RS10290 - 4-oxalocrotonate tautomerase family protein, at 2,220,034 to 2,220,267 _RS10290 ABIE51_RS10295: ABIE51_RS10295 - LysR substrate-binding domain-containing protein, at 2,220,457 to 2,221,371 _RS10295 ABIE51_RS10300: ABIE51_RS10300 - RidA family protein, at 2,221,542 to 2,221,934 _RS10300
Group Condition ABIE51_RS10280 ABIE51_RS10285 ABIE51_RS10290 ABIE51_RS10295 ABIE51_RS10300
carbon source D-Glucuronic Acid (C) +0.1 -1.8 N.D. +0.1 -0.2
carbon source succinate (C) -0.3 -1.3 N.D. +0.2 +0.1
carbon source D-Galactose (C) -0.2 -1.1 N.D. +0.1 -0.1
carbon source L-Glutamine (C) -0.1 -0.6 N.D. -0.3 -0.4
dmso control DMSO control -0.2 -0.5 N.D. -0.2 -0.3
stress R2A with 2-pentyl-furan 21.3684 mM -0.1 -0.8 N.D. +0.0 -0.2
carbon source L-Tryptophan (C) -0.2 -0.3 N.D. +0.0 -0.6
carbon source pyruvate (C) -0.1 -0.6 N.D. -0.2 -0.1
carbon source casaminos (C) -0.1 -1.0 N.D. +0.1 +0.0
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.1 -0.8 N.D. -0.1 -0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.0 -0.7 N.D. +0.1 -0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -0.0 -1.1 N.D. +0.1 +0.3
carbon source D-Maltose (C) +0.1 -0.8 N.D. +0.2 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM +0.3 -0.7 N.D. -0.0 -0.0
r2a no stress control R2A no stress control +0.2 -0.7 N.D. +0.0 +0.1
stress R2A with 3-octanone 1.77016666666667 mM +0.1 -0.6 N.D. -0.2 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 -0.3 N.D. -0.1 +0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.1 +0.6 N.D. -0.2 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 +0.6 N.D. +0.0 -0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 +0.6 N.D. -0.3 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.4 +0.3 N.D. -0.2 -0.3
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.1 +0.6 N.D. -0.0 -0.4
carbon source Fumarate (C) +0.5 -0.1 N.D. +0.2 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 +1.0 N.D. -0.1 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 +1.0 N.D. -0.1 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 +0.8 N.D. -0.2 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 +1.0 N.D. -0.2 -0.0
carbon source L-Malic (C) -0.1 +0.5 N.D. +0.1 +0.5
carbon source propionate (C) +0.2 +0.8 N.D. +0.3 -0.2
carbon source Ying_all64 rep A; time point 2 +0.1 +0.8 N.D. +0.1 +0.1
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