Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS10110 and ABIE51_RS10115 overlap by 4 nucleotidesABIE51_RS10115 and ABIE51_RS10120 are separated by 27 nucleotidesABIE51_RS10120 and ABIE51_RS10125 overlap by 4 nucleotidesABIE51_RS10125 and ABIE51_RS10130 are separated by 55 nucleotides ABIE51_RS10110: ABIE51_RS10110 - hydrogenase subunit MbhD domain-containing protein, at 2,177,592 to 2,178,536 _RS10110 ABIE51_RS10115: ABIE51_RS10115 - NADH-quinone oxidoreductase subunit K, at 2,178,533 to 2,178,874 _RS10115 ABIE51_RS10120: ABIE51_RS10120 - proton-conducting transporter membrane subunit, at 2,178,902 to 2,180,404 _RS10120 ABIE51_RS10125: ABIE51_RS10125 - proton-conducting transporter membrane subunit, at 2,180,401 to 2,181,996 _RS10125 ABIE51_RS10130: ABIE51_RS10130 - efflux transporter outer membrane subunit, at 2,182,052 to 2,183,506 _RS10130
Group Condition ABIE51_RS10110 ABIE51_RS10115 ABIE51_RS10120 ABIE51_RS10125 ABIE51_RS10130
carbon source succinate (C) -0.4 -0.1 -0.5 -0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 -0.9 -0.3 -0.2 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.0 -1.2 -0.1 -0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 1 +0.1 -0.8 -0.1 -0.2 -0.1
carbon source Ying_sugar7 rep A; time point 2 -0.1 -0.7 -0.2 -0.1 -0.1
carbon source Ying_all64 rep B; time point 3 -0.2 -0.2 -0.2 -0.1 -0.3
carbon source Ying_Others16 rep C; time point 1 -0.0 -0.8 -0.1 +0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.0 -0.6 -0.0 -0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.6 +0.0 -0.0 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.2 -0.6 -0.3 -0.2 +0.0
carbon source Ying_all64 rep A; time point 2 +0.1 -0.7 +0.0 -0.3 +0.0
carbon source Ying_Nucleobase14 rep A; time point 1 +0.1 -0.6 -0.3 +0.0 +0.1
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.2 -0.6 -0.1 +0.0 +0.1
carbon source D-Glucuronic Acid (C) -0.1 -0.8 +0.3 +0.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.3 -0.3 -0.2 -0.2 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.3 -0.2 -0.4 -0.2 +0.1
carbon source L-tyrosine (C) -0.1 +0.5 -0.9 -0.1 +0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.1 +0.4 -0.1 +0.0 -0.3
carbon source D-Maltose (C) +0.4 +0.1 -0.2 -0.1 -0.2
carbon source Fumarate (C) +0.5 -0.7 -0.0 +0.3 -0.1
stress R2A with 1-octen-3-ol 1.3568235 mM +0.2 -0.3 +0.2 +0.1 -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 +0.3 -0.4 -0.0 +0.1 +0.2
carbon source Fumarate (C) +0.0 +0.9 -0.5 +0.1 -0.1
stress R2A with 2-pentyl-furan 21.3684 mM +0.0 +0.7 -0.1 -0.1 -0.1
stress R2A with 2-pentyl-furan 21.3684 mM -0.2 +0.5 +0.2 +0.1 -0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -0.1 +0.8 +0.1 -0.0 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM +0.3 +0.1 +0.2 -0.2 +0.2
carbon source L-Tryptophan (C) -0.1 +0.7 +0.2 -0.1 +0.0
carbon source acetate (C) +0.5 +0.3 -0.1 +0.2 -0.1
r2a no stress control R2A no stress control +0.2 +0.9 -0.1 -0.0 -0.0
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ABIE51_RS10110
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