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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09785 and ABIE51_RS09790 are separated by 30 nucleotides
ABIE51_RS09790 and ABIE51_RS09795 overlap by 14 nucleotides
ABIE51_RS09795 and ABIE51_RS09800 are separated by 118 nucleotides
ABIE51_RS09800 and ABIE51_RS09805 are separated by 223 nucleotides
ABIE51_RS09785: ABIE51_RS09785 - SURF1 family protein, at 2,113,168 to 2,113,941
_RS09785
ABIE51_RS09790: ABIE51_RS09790 - ATP-binding protein, at 2,113,972 to 2,115,336
_RS09790
ABIE51_RS09795: ABIE51_RS09795 - response regulator transcription factor, at 2,115,323 to 2,115,862
_RS09795
ABIE51_RS09800: ABIE51_RS09800 - VOC family protein, at 2,115,981 to 2,116,472
_RS09800
ABIE51_RS09805: ABIE51_RS09805 - M13 family metallopeptidase, at 2,116,696 to 2,118,717
_RS09805
Group
Condition
ABIE51
_RS09785
ABIE51
_RS09790
ABIE51
_RS09795
ABIE51
_RS09800
ABIE51
_RS09805
stress
R2A with 2-pentyl-furan 21.3684 mM
-1.1
-1.6
N.D.
+0.1
-0.1
r2a no stress control
R2A no stress control
-0.7
-1.4
N.D.
-0.4
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.7
-1.3
N.D.
-0.3
-0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.9
-1.3
N.D.
-0.3
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.8
-1.3
N.D.
-0.2
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.7
-1.0
N.D.
-0.7
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.8
-1.2
N.D.
-0.3
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
-0.7
-1.3
N.D.
-0.3
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.7
-1.6
N.D.
+0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.9
-1.0
N.D.
-0.3
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.8
-1.3
N.D.
-0.2
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.9
-1.4
N.D.
+0.1
-0.1
r2a no stress control
R2A no stress control
-0.6
-1.2
N.D.
-0.5
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.8
-1.4
N.D.
+0.0
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.8
-0.7
N.D.
-0.6
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.6
-1.7
N.D.
+0.3
-0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-1.0
-1.1
N.D.
+0.2
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.6
-1.4
N.D.
+0.1
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-1.2
N.D.
-0.4
+0.1
stress
R2A with 3-octanone 5.31033333333333 mM
-0.9
-1.2
N.D.
+0.1
-0.0
stress
R2A with 3-octanone 5.31033333333333 mM
-0.9
-1.1
N.D.
+0.1
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.9
-1.3
N.D.
+0.4
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.9
-1.1
N.D.
+0.2
-0.1
stress
R2A with 3-octanone 1.77016666666667 mM
-0.9
-1.2
N.D.
+0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.7
-1.2
N.D.
+0.2
-0.1
r2a no stress control
R2A no stress control
-0.5
-1.2
N.D.
+0.2
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.8
-0.8
N.D.
+0.4
-0.2
stress
R2A with 3-octanone 1.77016666666667 mM
-0.8
-0.9
N.D.
+0.4
-0.1
carbon source
D-Maltose (C)
+0.2
+0.5
N.D.
-1.7
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.4
-1.0
N.D.
+0.7
-0.2
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