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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09725 and ABIE51_RS09730 are separated by 1100 nucleotides
ABIE51_RS09730 and ABIE51_RS09735 are separated by 62 nucleotides
ABIE51_RS09735 and ABIE51_RS09740 are separated by 278 nucleotides
ABIE51_RS09740 and ABIE51_RS09745 are separated by 153 nucleotides
ABIE51_RS09725: ABIE51_RS09725 - response regulator, at 2,098,468 to 2,099,073
_RS09725
ABIE51_RS09730: ABIE51_RS09730 - ATP-binding protein, at 2,100,174 to 2,102,372
_RS09730
ABIE51_RS09735: ABIE51_RS09735 - hypothetical protein, at 2,102,435 to 2,103,652
_RS09735
ABIE51_RS09740: ABIE51_RS09740 - amidohydrolase family protein, at 2,103,931 to 2,105,334
_RS09740
ABIE51_RS09745: ABIE51_RS09745 - DUF4410 domain-containing protein, at 2,105,488 to 2,106,249
_RS09745
Group
Condition
ABIE51
_RS09725
ABIE51
_RS09730
ABIE51
_RS09735
ABIE51
_RS09740
ABIE51
_RS09745
carbon source
2-Deoxy-D-Ribose (C)
N.D.
-0.5
-0.2
-0.0
-0.3
carbon source
L-Malic (C)
N.D.
-0.3
-0.2
-0.2
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.3
-0.1
-0.1
-0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
N.D.
-0.2
-0.2
+0.0
-0.2
carbon source
L-tyrosine (C)
N.D.
-0.3
-0.5
+0.1
+0.0
carbon source
Ying_all64 rep A; time point 1
N.D.
-0.1
-0.2
-0.0
-0.2
carbon source
D-Galactose (C)
N.D.
-0.0
-0.2
-0.0
-0.3
carbon source
Ying_all64 rep B; time point 1
N.D.
+0.0
-0.3
+0.0
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.0
-0.1
-0.0
-0.4
carbon source
Ying_Nucleobase14 rep A; time point 1
N.D.
-0.1
-0.2
+0.1
-0.4
carbon source
Ying_OrganicAcid7 rep C; time point 1
N.D.
+0.0
-0.2
+0.1
-0.4
carbon source
Ying_sugar7 rep A; time point 2
N.D.
-0.1
-0.2
+0.1
-0.2
carbon source
Ying_sugar7 rep C; time point 2
N.D.
-0.1
-0.2
+0.1
-0.2
carbon source
Ying_Others16 rep A; time point 1
N.D.
+0.1
-0.2
+0.1
-0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
N.D.
-0.1
-0.1
+0.2
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
N.D.
-0.1
-0.3
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
N.D.
+0.1
-0.1
+0.1
-0.3
carbon source
L-Glutamine (C)
N.D.
-0.2
-0.0
-0.1
+0.3
carbon source
Glucuronamide (C)
N.D.
-0.1
-0.1
+0.2
-0.1
carbon source
propionate (C)
N.D.
-0.3
-0.0
+0.1
+0.2
carbon source
Fumarate (C)
N.D.
-0.0
-0.3
+0.1
+0.1
carbon source
succinate (C)
N.D.
-0.1
-0.4
+0.1
+0.4
carbon source
Ying_Others16 rep B; time point 1
N.D.
-0.1
-0.2
+0.2
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 1
N.D.
+0.3
-0.0
+0.0
-0.2
carbon source
D-Maltose (C)
N.D.
-0.1
-0.2
+0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
-0.0
-0.2
+0.1
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.1
-0.1
+0.0
+0.4
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
+0.2
-0.1
+0.1
+0.3
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
+0.3
+0.2
-0.0
-0.0
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
+0.3
+0.1
-0.1
+0.3
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