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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09705 and ABIE51_RS09710 are separated by 7 nucleotides
ABIE51_RS09710 and ABIE51_RS09715 are separated by 3 nucleotides
ABIE51_RS09715 and ABIE51_RS09720 are separated by 26 nucleotides
ABIE51_RS09720 and ABIE51_RS09725 are separated by 231 nucleotides
ABIE51_RS09705: ABIE51_RS09705 - efflux transporter outer membrane subunit, at 2,094,616 to 2,096,064
_RS09705
ABIE51_RS09710: ABIE51_RS09710 - HlyD family secretion protein, at 2,096,072 to 2,097,253
_RS09710
ABIE51_RS09715: ABIE51_RS09715 - DUF3302 domain-containing protein, at 2,097,257 to 2,097,853
_RS09715
ABIE51_RS09720: ABIE51_RS09720 - response regulator, at 2,097,880 to 2,098,236
_RS09720
ABIE51_RS09725: ABIE51_RS09725 - response regulator, at 2,098,468 to 2,099,073
_RS09725
Group
Condition
ABIE51
_RS09705
ABIE51
_RS09710
ABIE51
_RS09715
ABIE51
_RS09720
ABIE51
_RS09725
carbon source
Glucuronamide (C)
-1.3
-0.2
N.D.
-0.3
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-0.6
N.D.
-0.6
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
-0.5
N.D.
-0.6
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.6
-0.2
N.D.
-0.7
N.D.
carbon source
D-Cellobiose (C)
-0.6
-0.2
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.9
-0.4
N.D.
-0.1
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.5
-0.2
N.D.
-0.7
N.D.
carbon source
Fumarate (C)
-0.0
+0.3
N.D.
-1.6
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-0.5
N.D.
-0.4
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
-0.5
N.D.
-0.2
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
-0.4
-0.4
N.D.
-0.3
N.D.
carbon source
propionate (C)
-1.1
+0.2
N.D.
-0.3
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.6
-0.3
N.D.
-0.2
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.5
-0.3
N.D.
-0.3
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.6
-0.4
N.D.
-0.1
N.D.
carbon source
Ying_Others16 rep B; time point 1
-0.4
+0.1
N.D.
-0.7
N.D.
carbon source
Ying_all64 rep B; time point 3
+0.2
-1.2
N.D.
-0.0
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
+0.1
-0.8
N.D.
-0.3
N.D.
stress
R2A with 3-octanone 1.77016666666667 mM
+0.2
-0.6
N.D.
-0.5
N.D.
carbon source
L-Glutamine (C)
-0.1
+0.3
N.D.
-0.8
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
+0.2
-0.5
N.D.
-0.3
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-0.4
+0.4
N.D.
-0.3
N.D.
r2a no stress control
R2A no stress control
-0.5
-0.2
N.D.
+0.4
N.D.
carbon source
L-Asparagine (C)
-0.7
+0.1
N.D.
+0.6
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.5
+0.7
N.D.
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.1
+0.5
N.D.
-0.5
N.D.
carbon source
Fumarate (C)
+0.2
-0.4
N.D.
+0.4
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.1
+0.8
N.D.
-0.4
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.4
+0.0
N.D.
+0.7
N.D.
carbon source
D-Galactose (C)
+0.5
-0.4
N.D.
+0.3
N.D.
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