Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS09660 and ABIE51_RS09665 are separated by 170 nucleotidesABIE51_RS09665 and ABIE51_RS09670 are separated by 16 nucleotidesABIE51_RS09670 and ABIE51_RS09675 are separated by 27 nucleotidesABIE51_RS09675 and ABIE51_RS09680 are separated by 18 nucleotides ABIE51_RS09660: ABIE51_RS09660 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 2,082,373 to 2,085,129 _RS09660 ABIE51_RS09665: ABIE51_RS09665 - MFS transporter, at 2,085,300 to 2,086,595 _RS09665 ABIE51_RS09670: ABIE51_RS09670 - MFS transporter, at 2,086,612 to 2,087,889 _RS09670 ABIE51_RS09675: ABIE51_RS09675 - guanine deaminase, at 2,087,917 to 2,089,251 _RS09675 ABIE51_RS09680: ABIE51_RS09680 - outer membrane protein OmpK, at 2,089,270 to 2,090,121 _RS09680
Group Condition ABIE51_RS09660 ABIE51_RS09665 ABIE51_RS09670 ABIE51_RS09675 ABIE51_RS09680
carbon source Ying_all64 rep B; time point 3 -0.3 -0.8 +0.2 -0.1 -0.3
carbon source D-Cellobiose (C) -0.4 -0.8 +0.0 -0.0 +0.2
carbon source Ying_sugar7 rep B; time point 3 +0.0 -0.7 +0.1 +0.1 -0.3
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 -0.8 +0.4 +0.2 -0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 -0.8 +0.2 +0.2 -0.0
carbon source succinate (C) -0.3 +0.4 -0.2 +0.1 -0.3
carbon source Glucuronamide (C) -0.3 +0.3 -0.2 +0.4 -0.4
carbon source propionate (C) +0.2 +0.3 -0.7 -0.1 +0.1
stress R2A with 3-octanone 1.77016666666667 mM +0.2 -0.6 +0.1 -0.0 +0.2
carbon source Fumarate (C) -0.1 -0.6 -0.1 +0.3 +0.2
carbon source L-Malic (C) -0.1 -0.9 +0.1 -0.0 +0.8
carbon source D-Galactose (C) -0.3 -0.6 -0.1 +0.2 +0.8
carbon source acetate (C) -0.1 -0.5 +0.1 +0.0 +0.5
carbon source L-Tryptophan (C) -0.0 +0.3 -0.5 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.1 -0.5 +0.3 +0.1 +0.5
carbon source L-tyrosine (C) +0.1 +0.2 -0.3 +0.2 +0.3
dmso control DMSO control +0.2 -0.2 -0.2 +0.1 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 +0.9 -0.4 -0.0 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 +0.5 -0.4 +0.0 +0.2
stress R2A with 1-octen-3-ol 0.904549 mM +0.2 +0.3 +0.3 -0.1 +0.3
carbon source Ying_Nucleobase14 rep C; time point 1 -0.0 +0.7 -0.1 +0.0 +0.3
carbon source D-Maltose (C) -0.0 +0.2 +0.2 +0.0 +0.7
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.1 +0.7 +0.1 -0.1 +0.2
stress R2A with 2-pentyl-furan 32.0526 mM -0.0 +0.7 +0.2 -0.2 +0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.0 +0.9 -0.1 -0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.3 +0.2 -0.1 +0.6
carbon source D-Glucose-6-Phosphate (C) +0.2 +0.3 +0.0 +0.4 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.1 +0.6 +0.1 +0.1 +0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 +0.8 -0.0 +0.0 +0.4
carbon source pyruvate (C) +0.0 +0.7 +0.0 +0.1 +0.4
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