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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09660 and ABIE51_RS09665 are separated by 170 nucleotides
ABIE51_RS09665 and ABIE51_RS09670 are separated by 16 nucleotides
ABIE51_RS09670 and ABIE51_RS09675 are separated by 27 nucleotides
ABIE51_RS09675 and ABIE51_RS09680 are separated by 18 nucleotides
ABIE51_RS09660: ABIE51_RS09660 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 2,082,373 to 2,085,129
_RS09660
ABIE51_RS09665: ABIE51_RS09665 - MFS transporter, at 2,085,300 to 2,086,595
_RS09665
ABIE51_RS09670: ABIE51_RS09670 - MFS transporter, at 2,086,612 to 2,087,889
_RS09670
ABIE51_RS09675: ABIE51_RS09675 - guanine deaminase, at 2,087,917 to 2,089,251
_RS09675
ABIE51_RS09680: ABIE51_RS09680 - outer membrane protein OmpK, at 2,089,270 to 2,090,121
_RS09680
Group
Condition
ABIE51
_RS09660
ABIE51
_RS09665
ABIE51
_RS09670
ABIE51
_RS09675
ABIE51
_RS09680
carbon source
Ying_all64 rep B; time point 3
-0.3
-0.8
+0.2
-0.1
-0.3
carbon source
D-Cellobiose (C)
-0.4
-0.8
+0.0
-0.0
+0.2
carbon source
Ying_sugar7 rep B; time point 3
+0.0
-0.7
+0.1
+0.1
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.0
-0.8
+0.4
+0.2
-0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
-0.8
+0.2
+0.2
-0.0
carbon source
succinate (C)
-0.3
+0.4
-0.2
+0.1
-0.3
carbon source
Glucuronamide (C)
-0.3
+0.3
-0.2
+0.4
-0.4
carbon source
propionate (C)
+0.2
+0.3
-0.7
-0.1
+0.1
stress
R2A with 3-octanone 1.77016666666667 mM
+0.2
-0.6
+0.1
-0.0
+0.2
carbon source
Fumarate (C)
-0.1
-0.6
-0.1
+0.3
+0.2
carbon source
L-Malic (C)
-0.1
-0.9
+0.1
-0.0
+0.8
carbon source
D-Galactose (C)
-0.3
-0.6
-0.1
+0.2
+0.8
carbon source
acetate (C)
-0.1
-0.5
+0.1
+0.0
+0.5
carbon source
L-Tryptophan (C)
-0.0
+0.3
-0.5
+0.1
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
-0.5
+0.3
+0.1
+0.5
carbon source
L-tyrosine (C)
+0.1
+0.2
-0.3
+0.2
+0.3
dmso control
DMSO control
+0.2
-0.2
-0.2
+0.1
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.0
+0.9
-0.4
-0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.2
+0.5
-0.4
+0.0
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.3
+0.3
-0.1
+0.3
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.0
+0.7
-0.1
+0.0
+0.3
carbon source
D-Maltose (C)
-0.0
+0.2
+0.2
+0.0
+0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
+0.7
+0.1
-0.1
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.0
+0.7
+0.2
-0.2
+0.4
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.0
+0.9
-0.1
-0.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
+0.3
+0.2
-0.1
+0.6
carbon source
D-Glucose-6-Phosphate (C)
+0.2
+0.3
+0.0
+0.4
+0.4
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.1
+0.6
+0.1
+0.1
+0.3
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
+0.8
-0.0
+0.0
+0.4
carbon source
pyruvate (C)
+0.0
+0.7
+0.0
+0.1
+0.4
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