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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09370 and ABIE51_RS09375 overlap by 1 nucleotides
ABIE51_RS09375 and ABIE51_RS09380 are separated by 97 nucleotides
ABIE51_RS09380 and ABIE51_RS09385 overlap by 4 nucleotides
ABIE51_RS09385 and ABIE51_RS09390 are separated by 69 nucleotides
ABIE51_RS09370: ABIE51_RS09370 - nucleoside-diphosphate sugar epimerase/dehydratase, at 2,019,585 to 2,021,495
_RS09370
ABIE51_RS09375: ABIE51_RS09375 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 2,021,495 to 2,022,394
_RS09375
ABIE51_RS09380: ABIE51_RS09380 - FAD-binding oxidoreductase, at 2,022,492 to 2,023,796
_RS09380
ABIE51_RS09385: ABIE51_RS09385 - tRNA-binding protein, at 2,023,793 to 2,024,128
_RS09385
ABIE51_RS09390: ABIE51_RS09390 - glycine zipper 2TM domain-containing protein, at 2,024,198 to 2,024,650
_RS09390
Group
Condition
ABIE51
_RS09370
ABIE51
_RS09375
ABIE51
_RS09380
ABIE51
_RS09385
ABIE51
_RS09390
carbon source
Ying_OrganicAcid7 rep B; time point 2
-4.0
-4.8
+0.0
+0.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
-3.5
-4.4
-0.0
-0.0
+0.3
carbon source
Ying_OrganicAcid7 rep C; time point 2
-3.1
-4.0
+0.1
-0.0
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 1
-2.7
-3.3
-0.0
+0.0
+0.1
carbon source
Ying_sugar7 rep A; time point 2
-1.9
-3.4
-0.1
-0.0
+0.0
carbon source
Ying_sugar7 rep B; time point 2
-2.1
-3.4
-0.0
+0.0
+0.2
carbon source
Ying_sugar7 rep C; time point 2
-1.9
-3.6
+0.0
+0.2
+0.2
carbon source
Ying_all64 rep A; time point 1
-2.3
-2.8
+0.1
-0.1
-0.0
carbon source
Ying_sugar7 rep A; time point 1
-2.1
-3.2
-0.0
+0.2
+0.2
carbon source
Ying_all64 rep C; time point 2
-2.6
-2.3
-0.0
+0.1
-0.1
carbon source
Ying_sugar7 rep C; time point 1
-2.1
-3.0
+0.1
-0.0
+0.2
carbon source
Ying_all64 rep C; time point 1
-2.3
-2.9
+0.0
+0.0
+0.3
carbon source
D-Galactose (C)
-2.9
-0.8
-0.0
-0.2
-1.0
carbon source
Glucuronamide (C)
-2.4
-2.2
+0.1
+0.4
-0.7
carbon source
Ying_all64 rep B; time point 1
-2.3
-2.4
+0.1
+0.0
-0.1
carbon source
Ying_all64 rep B; time point 2
-2.4
-2.3
+0.0
+0.1
-0.1
carbon source
Ying_all64 rep A; time point 2
-2.5
-2.2
+0.1
+0.0
+0.5
carbon source
Ying_all64 rep C; time point 3
-2.9
-1.7
+0.1
+0.1
+0.3
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.8
-3.2
-0.1
-0.2
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
-1.9
-2.3
+0.1
+0.0
+0.3
carbon source
Ying_all64 rep A; time point 3
-2.3
-1.6
-0.0
+0.1
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-1.9
-1.9
-0.0
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
-1.5
-2.3
+0.1
-0.2
+0.1
carbon source
Ying_all64 rep B; time point 3
-2.4
-1.5
-0.0
+0.1
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-1.1
-2.3
-0.0
+0.3
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 2
-1.2
-2.8
+0.1
+0.2
+0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
-1.6
-2.0
+0.1
-0.1
+0.4
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-1.2
-2.3
-0.0
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
-1.4
-2.3
-0.0
+0.3
+0.3
carbon source
L-Asparagine (C)
-2.2
+0.0
+0.1
+0.7
-1.0
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