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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09310 and ABIE51_RS09315 are separated by 179 nucleotides
ABIE51_RS09315 and ABIE51_RS09320 are separated by 189 nucleotides
ABIE51_RS09320 and ABIE51_RS09325 are separated by 129 nucleotides
ABIE51_RS09325 and ABIE51_RS09330 are separated by 4 nucleotides
ABIE51_RS09310: ABIE51_RS09310 - TetR/AcrR family transcriptional regulator, at 2,009,628 to 2,010,122
_RS09310
ABIE51_RS09315: ABIE51_RS09315 - GNAT family N-acetyltransferase, at 2,010,302 to 2,010,859
_RS09315
ABIE51_RS09320: ABIE51_RS09320 - carbon-nitrogen hydrolase, at 2,011,049 to 2,011,936
_RS09320
ABIE51_RS09325: ABIE51_RS09325 - agmatine deiminase family protein, at 2,012,066 to 2,013,118
_RS09325
ABIE51_RS09330: ABIE51_RS09330 - hypothetical protein, at 2,013,123 to 2,013,452
_RS09330
Group
Condition
ABIE51
_RS09310
ABIE51
_RS09315
ABIE51
_RS09320
ABIE51
_RS09325
ABIE51
_RS09330
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.3
-0.0
N.D.
N.D.
+0.2
carbon source
Ying_Others16 rep A; time point 1
-0.3
+0.0
N.D.
N.D.
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.3
-0.0
N.D.
N.D.
+0.3
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
-0.1
N.D.
N.D.
+0.3
carbon source
Fumarate (C)
+0.3
-0.1
N.D.
N.D.
-0.1
carbon source
Ying_all64 rep A; time point 1
-0.2
+0.1
N.D.
N.D.
+0.2
carbon source
pyruvate (C)
+0.3
+0.2
N.D.
N.D.
-0.3
carbon source
L-Asparagine (C)
+0.4
-0.0
N.D.
N.D.
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.1
+0.1
N.D.
N.D.
+0.3
carbon source
D-Maltose (C)
+0.0
-0.1
N.D.
N.D.
+0.4
carbon source
D-Glucuronic Acid (C)
+0.2
-0.1
N.D.
N.D.
+0.3
carbon source
D-Galactose (C)
+0.4
-0.0
N.D.
N.D.
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
+0.1
N.D.
N.D.
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.0
+0.1
N.D.
N.D.
+0.3
r2a no stress control
R2A no stress control
+0.2
+0.1
N.D.
N.D.
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.1
N.D.
N.D.
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
+0.0
N.D.
N.D.
+0.3
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
+0.1
N.D.
N.D.
+0.2
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
+0.1
N.D.
N.D.
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
+0.2
N.D.
N.D.
+0.2
carbon source
L-Tryptophan (C)
+0.2
-0.1
N.D.
N.D.
+0.3
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.3
+0.1
N.D.
N.D.
+0.1
carbon source
Ying_all64 rep C; time point 2
+0.1
+0.1
N.D.
N.D.
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.0
N.D.
N.D.
+0.4
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
+0.1
N.D.
N.D.
+0.4
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.2
+0.0
N.D.
N.D.
+0.3
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
+0.1
N.D.
N.D.
+0.2
carbon source
Ying_all64 rep B; time point 1
+0.2
+0.1
N.D.
N.D.
+0.4
carbon source
succinate (C)
+0.2
+0.2
N.D.
N.D.
+0.4
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.8
+0.1
N.D.
N.D.
+0.3
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