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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS09145 and ABIE51_RS09150 are separated by 96 nucleotides
ABIE51_RS09150 and ABIE51_RS09155 are separated by 331 nucleotides
ABIE51_RS09155 and ABIE51_RS09160 are separated by 166 nucleotides
ABIE51_RS09160 and ABIE51_RS09165 are separated by 300 nucleotides
ABIE51_RS09145: ABIE51_RS09145 - DUF72 domain-containing protein, at 1,965,806 to 1,966,688
_RS09145
ABIE51_RS09150: ABIE51_RS09150 - glycerophosphodiester phosphodiesterase family protein, at 1,966,785 to 1,968,095
_RS09150
ABIE51_RS09155: ABIE51_RS09155 - M3 family metallopeptidase, at 1,968,427 to 1,970,637
_RS09155
ABIE51_RS09160: ABIE51_RS09160 - amidohydrolase family protein, at 1,970,804 to 1,972,870
_RS09160
ABIE51_RS09165: ABIE51_RS09165 - TonB-dependent receptor, at 1,973,171 to 1,975,501
_RS09165
Group
Condition
ABIE51
_RS09145
ABIE51
_RS09150
ABIE51
_RS09155
ABIE51
_RS09160
ABIE51
_RS09165
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.2
+0.1
-0.1
-0.1
+0.1
stress
R2A with 3-octanone 2.65516666666667 mM
-0.3
+0.2
-0.1
+0.0
+0.0
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.3
-0.0
+0.1
+0.0
+0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.2
-0.1
+0.0
+0.1
+0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
-0.1
+0.1
+0.1
+0.1
carbon source
Fumarate (C)
+0.2
-0.2
-0.0
+0.1
-0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.2
+0.1
-0.0
-0.0
-0.1
carbon source
Ying_Others16 rep C; time point 1
-0.1
-0.1
+0.1
+0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.1
-0.1
+0.0
-0.1
carbon source
D-Galactose (C)
+0.4
-0.1
-0.0
-0.0
-0.1
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.2
-0.1
+0.1
+0.1
+0.0
carbon source
D-Cellobiose (C)
+0.4
-0.1
+0.0
+0.0
-0.1
carbon source
Ying_sugar7 rep A; time point 1
-0.1
+0.0
+0.3
+0.0
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.0
+0.1
+0.3
-0.0
+0.0
carbon source
succinate (C)
-0.1
+0.2
+0.1
+0.0
+0.2
carbon source
Ying_all64 rep A; time point 3
-0.2
+0.1
+0.2
+0.1
+0.2
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
-0.1
+0.4
-0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.2
-0.0
+0.1
+0.1
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.1
-0.1
+0.4
+0.0
+0.0
carbon source
Ying_all64 rep C; time point 3
+0.0
+0.0
+0.2
+0.1
+0.2
carbon source
Ying_Others16 rep A; time point 1
+0.1
+0.1
+0.0
+0.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.1
+0.0
+0.3
+0.1
+0.1
carbon source
Ying_all64 rep A; time point 1
+0.1
+0.0
+0.2
+0.1
+0.1
carbon source
Ying_all64 rep A; time point 2
-0.0
+0.1
+0.2
+0.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.0
-0.0
+0.5
+0.1
+0.0
carbon source
Ying_all64 rep C; time point 2
+0.1
+0.0
+0.3
+0.1
+0.3
carbon source
Ying_all64 rep B; time point 2
+0.3
-0.0
+0.3
+0.0
+0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.7
+0.1
-0.0
+0.1
-0.0
carbon source
Ying_all64 rep C; time point 1
+0.3
+0.0
+0.3
+0.0
+0.2
carbon source
Ying_all64 rep B; time point 1
+0.3
+0.1
+0.2
+0.1
+0.1
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