Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS08955 and ABIE51_RS08960 are separated by 90 nucleotidesABIE51_RS08960 and ABIE51_RS08965 are separated by 25 nucleotidesABIE51_RS08965 and ABIE51_RS08970 are separated by 150 nucleotidesABIE51_RS08970 and ABIE51_RS08975 are separated by 171 nucleotides ABIE51_RS08955: ABIE51_RS08955 - twitching motility response regulator PilH, at 1,915,969 to 1,916,334 _RS08955 ABIE51_RS08960: ABIE51_RS08960 - YhdH/YhfP family quinone oxidoreductase, at 1,916,425 to 1,917,417 _RS08960 ABIE51_RS08965: ABIE51_RS08965 - GIY-YIG nuclease family protein, at 1,917,443 to 1,917,739 _RS08965 ABIE51_RS08970: ABIE51_RS08970 - TIGR00730 family Rossman fold protein, at 1,917,890 to 1,918,483 _RS08970 ABIE51_RS08975: ABIE51_RS08975 - SAM-dependent methyltransferase, at 1,918,655 to 1,919,401 _RS08975
Group Condition ABIE51_RS08955 ABIE51_RS08960 ABIE51_RS08965 ABIE51_RS08970 ABIE51_RS08975
carbon source Ying_AminoAcid20 rep C; time point 3 -0.3 -2.9 +0.5 +0.2 -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 +0.2 -2.6 -0.2 +0.0 +0.1
carbon source Glucuronamide (C) -0.2 -0.0 -0.7 -0.7 -0.5
carbon source casaminos (C) -0.2 -1.0 -0.3 -0.0 -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -2.5 +0.3 +0.2 +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.2 -2.2 -0.0 -0.1 +0.7
carbon source Ying_AminoAcid20 rep B; time point 3 -0.0 -2.4 +0.4 +0.3 -0.0
carbon source casaminos (C) +0.1 -0.9 -0.4 -0.3 -0.3
carbon source Ying_AminoAcid20 rep C; time point 1 -0.3 -1.4 +0.1 -0.1 +0.3
carbon source L-Glutamine (C) +0.3 -0.1 -0.4 -0.8 -0.3
carbon source Ying_AminoAcid20 rep A; time point 1 -0.3 -1.2 +0.1 +0.1 +0.0
carbon source L-Malic (C) -0.4 -0.6 +0.2 +0.0 -0.3
carbon source Ying_AminoAcid20 rep A; time point 2 +0.3 -1.8 -0.0 +0.0 +0.7
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 -1.2 +0.1 +0.2 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.3 -0.2 -0.6 -0.3 +0.2
carbon source L-Asparagine (C) -0.4 +0.4 +0.1 -0.5 -0.1
stress R2A with 1-octen-3-ol 1.3568235 mM +0.0 -0.9 +0.5 +0.1 -0.1
carbon source D-Maltose (C) -0.8 +0.2 +0.1 -0.4 +0.5
stress R2A with 3-octanone 5.31033333333333 mM -0.6 -0.7 +0.4 +0.2 +0.4
carbon source D-Cellobiose (C) +0.8 -0.6 -0.1 +0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.7 -0.3 -0.2 -0.1 -0.2
carbon source Ying_Others16 rep A; time point 1 +0.6 -0.2 -0.1 -0.3 -0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 -0.6 -0.2 +0.1 +0.5
carbon source Ying_Others16 rep B; time point 1 -0.5 +0.2 -0.2 -0.2 +0.7
carbon source Ying_sugar7 rep A; time point 2 -0.3 +0.2 -0.3 -0.0 +0.7
stress R2A with 2-pentyl-furan 32.0526 mM +0.3 +0.3 +0.4 +0.1 -0.7
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.7 -0.3 -0.2 +0.0 +0.3
carbon source Ying_all64 rep A; time point 3 +0.1 +0.4 +0.4 +0.3 -0.4
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.4 +0.2 -0.2 +0.1 +0.5
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.2 +0.4 +0.1 +0.3 +0.6
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ABIE51_RS08955
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ABIE51_RS08960
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ABIE51_RS08970
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ABIE51_RS08975
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