Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS08440 and ABIE51_RS08445 overlap by 4 nucleotidesABIE51_RS08445 and ABIE51_RS08450 are separated by 275 nucleotidesABIE51_RS08450 and ABIE51_RS08455 are separated by 74 nucleotidesABIE51_RS08455 and ABIE51_RS08460 are separated by 138 nucleotides ABIE51_RS08440: ABIE51_RS08440 - HAMP domain-containing sensor histidine kinase, at 1,794,138 to 1,795,409 _RS08440 ABIE51_RS08445: ABIE51_RS08445 - response regulator transcription factor, at 1,795,406 to 1,796,110 _RS08445 ABIE51_RS08450: ABIE51_RS08450 - phosphatase PAP2 family protein, at 1,796,386 to 1,797,129 _RS08450 ABIE51_RS08455: ABIE51_RS08455 - phosphoethanolamine--lipid A transferase, at 1,797,204 to 1,798,803 _RS08455 ABIE51_RS08460: ABIE51_RS08460 - helix-hairpin-helix domain-containing protein, at 1,798,942 to 1,800,447 _RS08460
Group Condition ABIE51_RS08440 ABIE51_RS08445 ABIE51_RS08450 ABIE51_RS08455 ABIE51_RS08460
carbon source Ying_all64 rep B; time point 3 -0.3 -0.3 -0.2 -0.1 -0.3
carbon source Ying_AminoAcid20 rep C; time point 3 -0.3 -0.2 +0.1 +0.1 -0.6
carbon source L-Malic (C) -0.3 -0.2 -0.0 +0.0 -0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.3 -0.9 +0.1 +0.2 +0.2
carbon source D-Maltose (C) -0.3 +0.2 -0.1 +0.1 -0.5
stress R2A with 3-octanone 2.65516666666667 mM -0.2 +0.1 +0.1 -0.1 -0.7
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.3 -0.8 +0.2 +0.1 +0.1
stress R2A with 2-pentyl-furan 21.3684 mM +0.2 +0.1 -0.4 -0.0 -0.6
stress R2A with 3-octanone 1.77016666666667 mM -0.4 +0.1 +0.2 -0.2 -0.1
carbon source D-Glucuronic Acid (C) +0.3 -0.3 +0.1 -0.4 -0.1
carbon source Ying_sugar7 rep B; time point 3 -0.2 -0.3 +0.4 +0.1 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.3 -0.7 +0.1 +0.0 +0.4
carbon source Ying_sugar7 rep A; time point 3 -0.2 -0.3 +0.2 +0.2 -0.3
carbon source Fumarate (C) +0.4 -0.1 -0.3 +0.0 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM -0.3 +0.1 +0.1 -0.2 +0.3
stress R2A with 2-pentyl-furan 32.0526 mM +0.1 +0.1 +0.1 +0.1 -0.5
carbon source Fumarate (C) -0.2 -0.1 +0.2 +0.2 +0.2
carbon source propionate (C) -0.3 +0.0 +0.3 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 +0.1 -0.2 +0.1 +0.5
carbon source L-Asparagine (C) -0.2 -0.1 +0.2 +0.0 +0.5
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 +0.4 -0.2 +0.0 +0.5
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 +0.2 -0.1 +0.1 +0.3
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.5 +0.2 -0.2 -0.1 +0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.3 +0.2 +0.1 -0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 +0.2 +0.0 +0.2 +0.6
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.2 +0.2 +0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.3 +0.2 -0.0 -0.0 +0.8
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.3 +0.4 +0.0 +0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.3 +0.4 -0.1 +0.2 +0.4
carbon source Ying_Others16 rep A; time point 1 +0.5 -0.2 -0.1 +0.2 +0.9
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