Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS08245 and ABIE51_RS08250 overlap by 4 nucleotidesABIE51_RS08250 and ABIE51_RS08255 are separated by 9 nucleotidesABIE51_RS08255 and ABIE51_RS08260 are separated by 79 nucleotidesABIE51_RS08260 and ABIE51_RS08265 are separated by 144 nucleotides ABIE51_RS08245: ABIE51_RS08245 - tRNA pseudouridine(38-40) synthase TruA, at 1,753,850 to 1,754,686 _RS08245 ABIE51_RS08250: ABIE51_RS08250 - phosphoribosylanthranilate isomerase, at 1,754,683 to 1,755,324 _RS08250 ABIE51_RS08255: ABIE51_RS08255 - LysR family transcriptional regulator, at 1,755,334 to 1,756,221 _RS08255 ABIE51_RS08260: ABIE51_RS08260 - tryptophan synthase subunit beta, at 1,756,301 to 1,757,509 _RS08260 ABIE51_RS08265: ABIE51_RS08265 - tryptophan synthase subunit alpha, at 1,757,654 to 1,758,472 _RS08265
Group Condition ABIE51_RS08245 ABIE51_RS08250 ABIE51_RS08255 ABIE51_RS08260 ABIE51_RS08265
carbon source Ying_sugar7 rep A; time point 2 +0.1 -6.3 -1.2 -5.3 -6.9
carbon source Ying_sugar7 rep C; time point 2 +0.2 -6.4 -1.0 -5.3 -6.9
carbon source Ying_sugar7 rep C; time point 3 -0.5 -6.1 -1.4 -4.6 -6.4
carbon source Ying_sugar7 rep A; time point 3 -0.3 -6.0 -1.5 -4.6 -6.4
carbon source Ying_sugar7 rep B; time point 2 +0.5 -6.4 -1.3 -5.4 -6.2
carbon source Ying_sugar7 rep B; time point 3 -0.4 -5.9 -1.7 -4.4 -6.3
carbon source casaminos (C) -0.5 -4.2 -2.0 -4.4 -4.9
carbon source casaminos (C) +0.1 -4.9 -2.3 -4.5 -3.8
carbon source Ying_sugar7 rep A; time point 1 +0.1 -5.7 -0.4 -4.2 -4.1
carbon source Ying_sugar7 rep C; time point 1 +0.6 -4.7 -0.6 -3.3 -3.3
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.2 -3.5 -0.1 -4.0 -3.4
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.0 -3.8 -0.2 -3.8 -3.2
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 -3.2 -0.2 -3.4 -3.0
carbon source D-Galactose (C) -0.2 -2.6 -0.6 -2.6 -3.2
carbon source D-Maltose (C) -0.8 -3.1 -0.5 -1.9 -1.9
carbon source D-Galactose (C) +0.3 -2.0 -0.7 -3.1 -2.5
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.8 -0.2 -2.1 -2.5
carbon source pyruvate (C) -0.4 -2.9 -0.1 -2.3 -1.9
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.4 -0.1 -1.8 -2.1
carbon source acetate (C) +0.1 -1.4 -0.0 -1.8 -2.4
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.1 -2.1 -0.0 -1.7 -1.5
carbon source D-Maltose (C) -0.2 -1.4 -0.9 -1.1 -1.5
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.5 -1.8 -0.4 -1.3 -1.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.7 -1.5 -0.3 -1.1 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.6 -1.8 -0.1 -1.2 -1.1
carbon source D-Cellobiose (C) -1.9 -0.9 +0.4 -0.7 -1.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.0 +1.5 +0.8 +1.6 +0.8
carbon source Ying_AminoAcid20 rep A; time point 1 -0.0 +1.4 +0.8 +1.6 +0.9
carbon source Ying_AminoAcid20 rep C; time point 2 +0.4 +1.8 +0.9 +1.4 +0.3
carbon source Ying_AminoAcid20 rep C; time point 1 +0.3 +1.5 +0.9 +1.6 +0.9
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ABIE51_RS08245
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ABIE51_RS08250
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ABIE51_RS08265
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