Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS08075 and ABIE51_RS08080 are separated by 236 nucleotidesABIE51_RS08080 and ABIE51_RS08085 are separated by 77 nucleotidesABIE51_RS08085 and ABIE51_RS08090 are separated by 198 nucleotidesABIE51_RS08090 and ABIE51_RS08095 are separated by 135 nucleotides ABIE51_RS08075: ABIE51_RS08075 - TraB/GumN family protein, at 1,718,669 to 1,719,718 _RS08075 ABIE51_RS08080: ABIE51_RS08080 - Rnf electron transport complex subunit RnfB, at 1,719,955 to 1,720,362 _RS08080 ABIE51_RS08085: ABIE51_RS08085 - methionine--tRNA ligase, at 1,720,440 to 1,722,512 _RS08085 ABIE51_RS08090: ABIE51_RS08090 - DUF2147 domain-containing protein, at 1,722,711 to 1,723,160 _RS08090 ABIE51_RS08095: ABIE51_RS08095 - TonB-dependent receptor, at 1,723,296 to 1,726,145 _RS08095
Group Condition ABIE51_RS08075 ABIE51_RS08080 ABIE51_RS08085 ABIE51_RS08090 ABIE51_RS08095
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.8 N.D. N.D. -0.1 +0.0
carbon source D-Cellobiose (C) -0.7 N.D. N.D. +0.1 -0.2
carbon source Ying_sugar7 rep B; time point 3 -0.5 N.D. N.D. -0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.4 N.D. N.D. -0.4 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.5 N.D. N.D. -0.2 +0.1
carbon source Ying_all64 rep B; time point 3 -0.7 N.D. N.D. +0.0 +0.1
carbon source Fumarate (C) -0.6 N.D. N.D. +0.1 +0.0
carbon source Ying_all64 rep A; time point 3 -0.8 N.D. N.D. +0.3 -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.5 N.D. N.D. +0.0 +0.1
carbon source succinate (C) -0.3 N.D. N.D. -0.4 +0.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.5 N.D. N.D. +0.2 -0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.4 N.D. N.D. -0.1 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.6 N.D. N.D. +0.1 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 N.D. N.D. -0.4 +0.1
carbon source Ying_sugar7 rep A; time point 2 -0.2 N.D. N.D. -0.2 +0.1
carbon source Ying_all64 rep C; time point 2 -0.5 N.D. N.D. +0.0 +0.1
carbon source pyruvate (C) -0.0 N.D. N.D. -0.4 +0.2
carbon source Ying_all64 rep B; time point 2 -0.5 N.D. N.D. +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 N.D. N.D. +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.3 N.D. N.D. +0.4 +0.0
carbon source L-Glutamine (C) -0.3 N.D. N.D. +0.3 +0.1
carbon source Ying_all64 rep A; time point 2 -0.2 N.D. N.D. +0.2 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 N.D. N.D. +0.4 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.2 N.D. N.D. +0.2 +0.2
carbon source Fumarate (C) -0.2 N.D. N.D. +0.3 +0.1
carbon source Glucuronamide (C) +0.2 N.D. N.D. +0.3 -0.3
carbon source L-Tryptophan (C) -0.2 N.D. N.D. +0.4 +0.0
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 N.D. N.D. +0.3 -0.1
carbon source L-Asparagine (C) +0.2 N.D. N.D. +0.5 +0.0
stress R2A with 3-octanone 5.31033333333333 mM +0.3 N.D. N.D. +0.3 +0.2
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