Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS07940 and ABIE51_RS07945 are separated by 131 nucleotidesABIE51_RS07945 and ABIE51_RS07950 overlap by 4 nucleotidesABIE51_RS07950 and ABIE51_RS07955 are separated by 281 nucleotidesABIE51_RS07955 and ABIE51_RS07960 are separated by 220 nucleotides ABIE51_RS07940: ABIE51_RS07940 - hypothetical protein, at 1,691,854 to 1,692,378 _RS07940 ABIE51_RS07945: ABIE51_RS07945 - hypothetical protein, at 1,692,510 to 1,693,463 _RS07945 ABIE51_RS07950: ABIE51_RS07950 - XrtA/PEP-CTERM system exopolysaccharide export protein, at 1,693,460 to 1,694,098 _RS07950 ABIE51_RS07955: ABIE51_RS07955 - UDP-glucose 4-epimerase GalE, at 1,694,380 to 1,695,465 _RS07955 ABIE51_RS07960: ABIE51_RS07960 - sulfatase-like hydrolase/transferase, at 1,695,686 to 1,697,479 _RS07960
Group Condition ABIE51_RS07940 ABIE51_RS07945 ABIE51_RS07950 ABIE51_RS07955 ABIE51_RS07960
carbon source D-Cellobiose (C) N.D. -1.5 -0.2 -0.2 -0.6
carbon source D-Glucuronic Acid (C) N.D. -1.2 -0.1 -0.2 -0.2
carbon source L-Asparagine (C) N.D. -1.4 -0.1 +0.3 +0.2
carbon source Fumarate (C) N.D. -0.4 -0.3 +0.1 -0.3
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. -0.9 +0.1 +0.2 -0.3
carbon source acetate (C) N.D. -0.8 -0.3 +0.1 +0.1
carbon source D-Galactose (C) N.D. -0.5 -0.2 +0.1 -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.5 -0.1 -0.1 -0.2
carbon source casaminos (C) N.D. -0.8 +0.0 -0.1 +0.0
carbon source Fumarate (C) N.D. -0.7 -0.1 +0.4 -0.2
carbon source pyruvate (C) N.D. -0.8 -0.0 +0.4 -0.2
carbon source L-Tryptophan (C) N.D. -0.6 -0.2 +0.3 -0.0
carbon source acetate (C) N.D. -0.6 -0.0 +0.2 -0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus N.D. -0.7 +0.1 +0.3 -0.1
carbon source L-tyrosine (C) N.D. -0.5 +0.1 +0.2 -0.1
carbon source Ying_Others16 rep B; time point 1 N.D. -0.6 +0.1 +0.4 -0.1
carbon source succinate (C) N.D. +0.3 -0.5 +0.3 -0.1
carbon source Glucuronamide (C) N.D. -0.6 +0.2 +0.2 +0.3
carbon source Ying_sugar7 rep B; time point 3 N.D. +0.3 +0.2 -0.4 +0.1
r2a no stress control R2A no stress control N.D. +0.7 -0.2 -0.2 -0.1
carbon source Ying_all64 rep B; time point 3 N.D. +0.4 +0.3 -0.5 +0.1
stress R2A with 2-pentyl-furan 32.0526 mM N.D. +0.6 +0.2 -0.1 -0.1
carbon source Ying_all64 rep A; time point 3 N.D. +0.6 +0.4 -0.4 +0.0
carbon source Ying_all64 rep C; time point 1 N.D. +0.5 +0.2 +0.1 -0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus N.D. +0.4 +0.2 -0.1 +0.0
stress R2A with 3-octanone 5.31033333333333 mM N.D. +0.2 +0.3 +0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media N.D. +0.6 +0.1 -0.1 +0.0
stress R2A with 3-octanone 5.31033333333333 mM N.D. +0.3 +0.3 +0.3 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media N.D. +0.7 -0.0 +0.1 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.4 +0.1 +0.4 +0.1
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