Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS07900 and ABIE51_RS07905 overlap by 4 nucleotidesABIE51_RS07905 and ABIE51_RS07910 are separated by 24 nucleotidesABIE51_RS07910 and ABIE51_RS07915 overlap by 4 nucleotidesABIE51_RS07915 and ABIE51_RS07920 overlap by 20 nucleotides ABIE51_RS07900: ABIE51_RS07900 - glycosyltransferase family 2 protein, at 1,683,037 to 1,684,170 _RS07900 ABIE51_RS07905: ABIE51_RS07905 - polysaccharide deacetylase family protein, at 1,684,167 to 1,684,928 _RS07905 ABIE51_RS07910: ABIE51_RS07910 - polysaccharide deacetylase family protein, at 1,684,953 to 1,685,990 _RS07910 ABIE51_RS07915: ABIE51_RS07915 - O-antigen ligase family protein, at 1,685,987 to 1,687,345 _RS07915 ABIE51_RS07920: ABIE51_RS07920 - glycosyltransferase, at 1,687,326 to 1,688,495 _RS07920
Group Condition ABIE51_RS07900 ABIE51_RS07905 ABIE51_RS07910 ABIE51_RS07915 ABIE51_RS07920
carbon source L-Asparagine (C) N.D. -0.1 -1.4 +0.3 +0.0
carbon source D-Galactose (C) N.D. -1.0 +0.1 +0.2 -0.5
stress R2A with 3-octanone 2.65516666666667 mM N.D. -0.4 -0.7 -0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media N.D. -0.7 -0.7 +0.1 +0.1
stress R2A with 3-octanone 2.65516666666667 mM N.D. -0.0 -0.9 +0.0 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.5 +0.5 +0.3 +0.1
carbon source D-Cellobiose (C) N.D. -1.0 +0.4 +0.1 -0.1
carbon source casaminos (C) N.D. -0.6 +0.3 +0.0 -0.3
carbon source acetate (C) N.D. -0.7 +0.4 -0.2 -0.0
carbon source D-Maltose (C) N.D. -1.0 +0.4 +0.1 -0.0
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM N.D. -0.5 +0.5 -0.1 -0.1
stress R2A with 1-octen-3-ol 1.3568235 mM N.D. -0.4 +0.4 +0.1 -0.2
carbon source L-Malic (C) N.D. +0.9 -0.9 -0.1 -0.0
carbon source D-Galactose (C) N.D. -0.5 +0.4 +0.1 -0.1
r2a no stress control R2A no stress control N.D. -0.6 +0.3 +0.1 +0.1
carbon source D-Maltose (C) N.D. -0.3 +0.3 +0.3 -0.2
stress R2A with 3-octanone 1.77016666666667 mM N.D. +0.3 -0.5 +0.1 +0.2
carbon source Ying_Others16 rep B; time point 1 N.D. -0.4 +0.8 +0.1 -0.3
carbon source pyruvate (C) N.D. -0.3 +0.6 +0.0 -0.2
stress R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM N.D. +0.4 +0.6 -0.1 -0.5
carbon source Ying_Others16 rep C; time point 1 N.D. -0.3 +0.7 +0.1 -0.0
carbon source propionate (C) N.D. -0.4 +0.7 +0.1 +0.2
carbon source succinate (C) N.D. -0.4 +1.0 +0.1 +0.0
carbon source Ying_Others16 rep A; time point 1 N.D. -0.2 +0.7 +0.2 -0.0
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. +0.3 +0.6 -0.2 +0.1
carbon source Fumarate (C) N.D. -0.0 +0.9 -0.0 -0.1
carbon source L-Tryptophan (C) N.D. +0.3 +0.7 +0.1 -0.2
carbon source Fumarate (C) N.D. -0.1 +1.0 +0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media N.D. +1.0 +0.0 +0.1 +0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus N.D. +0.4 +0.4 +0.3 +0.1
remove
ABIE51_RS07900
plot		 remove
ABIE51_RS07905
plot		 remove
ABIE51_RS07910		 remove
ABIE51_RS07915
plot		 remove
ABIE51_RS07920
plot