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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS07445 and ABIE51_RS07450 overlap by 4 nucleotides
ABIE51_RS07450 and ABIE51_RS07455 overlap by 8 nucleotides
ABIE51_RS07455 and ABIE51_RS07460 overlap by 4 nucleotides
ABIE51_RS07460 and ABIE51_RS07465 overlap by 41 nucleotides
ABIE51_RS07445: ABIE51_RS07445 - glycosyltransferase family 4 protein, at 1,572,838 to 1,573,977
_RS07445
ABIE51_RS07450: ABIE51_RS07450 - glycosyltransferase, at 1,573,974 to 1,575,110
_RS07450
ABIE51_RS07455: ABIE51_RS07455 - glycosyltransferase, at 1,575,103 to 1,576,197
_RS07455
ABIE51_RS07460: ABIE51_RS07460 - glycosyltransferase, at 1,576,194 to 1,577,360
_RS07460
ABIE51_RS07465: ABIE51_RS07465 - hypothetical protein, at 1,577,320 to 1,577,598
_RS07465
Group
Condition
ABIE51
_RS07445
ABIE51
_RS07450
ABIE51
_RS07455
ABIE51
_RS07460
ABIE51
_RS07465
carbon source
L-Malic (C)
-0.0
-1.2
-0.1
-0.5
-0.3
carbon source
Ying_all64 rep B; time point 3
-0.1
+0.3
+0.3
+0.1
-1.5
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.2
+0.2
+0.1
-0.1
-0.9
carbon source
2-Deoxy-D-Ribose (C)
-0.3
-0.3
-0.6
+0.3
+0.1
carbon source
succinate (C)
-0.2
-0.9
-0.4
-0.1
+0.9
carbon source
D-Galactose (C)
-0.1
-0.4
-0.3
+0.0
+0.5
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.2
+0.0
+0.3
+0.1
-0.9
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
-0.3
-0.3
+0.1
+0.4
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
-0.4
+0.6
-0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.0
-1.1
+0.1
+0.2
+0.8
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.4
-0.2
-0.1
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.2
-0.6
-0.3
+0.0
+0.8
carbon source
Ying_Others16 rep B; time point 1
+0.5
-0.8
+0.1
+0.1
+0.6
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.3
-0.0
-0.3
-0.1
+0.7
carbon source
Ying_all64 rep C; time point 1
+0.2
-0.4
-0.0
+0.0
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.3
-0.4
+0.2
+0.1
+0.6
carbon source
Ying_sugar7 rep A; time point 1
+0.1
-0.2
-0.1
+0.2
+0.8
carbon source
pyruvate (C)
+0.1
-0.4
+0.1
-0.0
+1.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.4
-0.3
+0.1
+0.2
+0.5
carbon source
D-Maltose (C)
+0.1
+0.1
+0.1
-0.3
+1.0
carbon source
Ying_Others16 rep A; time point 1
+0.2
-0.2
+0.0
+0.1
+0.8
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.3
-0.5
+0.1
+0.0
+1.0
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
-0.2
+0.2
+0.1
+1.0
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.1
-0.1
+0.5
+0.1
+0.7
carbon source
D-Glucose-6-Phosphate (C)
+0.4
+0.1
+0.1
-0.1
+0.8
carbon source
Ying_Others16 rep C; time point 1
+0.2
+0.1
+0.1
+0.2
+0.7
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.2
+0.1
+0.4
+0.2
+0.6
carbon source
L-tyrosine (C)
+0.2
+0.2
+0.3
+0.2
+0.7
carbon source
L-Asparagine (C)
+0.2
-0.4
+0.5
+0.7
+0.8
carbon source
D-Cellobiose (C)
-0.1
+0.7
+0.3
+0.4
+0.9
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