Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS07410 and ABIE51_RS07415 are separated by 55 nucleotidesABIE51_RS07415 and ABIE51_RS07420 are separated by 523 nucleotidesABIE51_RS07420 and ABIE51_RS07425 overlap by 14 nucleotidesABIE51_RS07425 and ABIE51_RS07430 overlap by 4 nucleotides ABIE51_RS07410: ABIE51_RS07410 - polysaccharide pyruvyl transferase family protein, at 1,565,937 to 1,566,434 _RS07410 ABIE51_RS07415: ABIE51_RS07415 - histidine phosphatase family protein, at 1,566,490 to 1,567,089 _RS07415 ABIE51_RS07420: ABIE51_RS07420 - UDP-glucuronic acid decarboxylase family protein, at 1,567,613 to 1,568,644 _RS07420 ABIE51_RS07425: ABIE51_RS07425 - SDR family NAD(P)-dependent oxidoreductase, at 1,568,631 to 1,569,782 _RS07425 ABIE51_RS07430: ABIE51_RS07430 - NAD-dependent epimerase/dehydratase family protein, at 1,569,779 to 1,570,879 _RS07430
Group Condition ABIE51_RS07410 ABIE51_RS07415 ABIE51_RS07420 ABIE51_RS07425 ABIE51_RS07430
carbon source Fumarate (C) -0.5 -0.8 -0.2 -0.3 +0.3
carbon source D-Maltose (C) +0.1 -0.3 -0.3 -0.4 -0.7
carbon source D-Glucuronic Acid (C) +0.5 -1.2 -0.1 -0.5 -0.3
carbon source acetate (C) +0.2 -0.5 -0.2 -0.1 -0.8
carbon source L-Glutamine (C) +0.5 -0.8 -0.1 -0.2 -0.5
carbon source Ying_all64 rep B; time point 3 -0.8 +0.1 -0.6 -0.0 +0.4
carbon source succinate (C) +0.4 -0.3 -0.2 -0.5 -0.2
carbon source Ying_sugar7 rep B; time point 3 -0.3 -0.3 -0.6 +0.2 +0.5
carbon source Glucuronamide (C) +0.2 +0.6 +0.3 -0.3 -1.2
carbon source D-Cellobiose (C) -0.5 +0.2 +0.4 -0.1 -0.4
carbon source casaminos (C) +0.6 -0.3 +0.1 -0.2 -0.6
carbon source L-tyrosine (C) +0.4 -0.4 +0.0 -0.1 -0.3
carbon source Ying_all64 rep A; time point 3 -0.3 -0.3 -0.2 +0.2 +0.4
carbon source D-Maltose (C) +0.2 +0.1 +0.3 -0.1 -0.7
dmso control DMSO control +0.1 -0.5 -0.2 +0.2 +0.5
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.0 -0.8 +0.2 +0.1 +0.4
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.2 -0.3 +0.5 +0.3
r2a no stress control R2A no stress control +0.4 -0.7 +0.2 +0.2 +0.3
carbon source Ying_Nucleobase14 rep C; time point 1 +0.4 -0.6 +0.3 +0.2 -0.0
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.1 -0.8 +0.1 +0.4 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.5 -0.1 +0.5 +0.2 -0.5
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.3 -0.6 +0.5 +0.4 +0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.4 -0.1 +0.6 +0.3 -0.4
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 -0.3 +0.7 +0.2 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.6 -0.3 +0.6 +0.5 -0.3
carbon source Ying_Others16 rep A; time point 1 +0.4 -0.3 +0.3 +0.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 +0.6 +0.2 +0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.3 -0.3 +0.6 +0.4 +0.2
carbon source Ying_Others16 rep B; time point 1 +0.4 +0.2 +0.0 +0.3 +0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.3 +0.5 +0.2 +0.0 +0.6
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