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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS07310 and ABIE51_RS07315 are separated by 30 nucleotides
ABIE51_RS07315 and ABIE51_RS07320 are separated by 61 nucleotides
ABIE51_RS07320 and ABIE51_RS07325 overlap by 1 nucleotides
ABIE51_RS07325 and ABIE51_RS07330 overlap by 8 nucleotides
ABIE51_RS07310: ABIE51_RS07310 - hypothetical protein, at 1,546,526 to 1,546,876
_RS07310
ABIE51_RS07315: ABIE51_RS07315 - P22 phage major capsid protein family protein, at 1,546,907 to 1,548,097
_RS07315
ABIE51_RS07320: ABIE51_RS07320 - packaged DNA stabilization gp4 family protein, at 1,548,159 to 1,548,566
_RS07320
ABIE51_RS07325: ABIE51_RS07325 - hypothetical protein, at 1,548,566 to 1,550,056
_RS07325
ABIE51_RS07330: ABIE51_RS07330 - hypothetical protein, at 1,550,049 to 1,550,870
_RS07330
Group
Condition
ABIE51
_RS07310
ABIE51
_RS07315
ABIE51
_RS07320
ABIE51
_RS07325
ABIE51
_RS07330
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.9
-0.8
-0.8
-0.8
-1.3
carbon source
Ying_AminoAcid20 rep B; time point 2
-1.2
-1.0
-0.8
-0.8
-0.7
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.8
-0.7
-1.0
-0.7
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.9
-0.6
-1.0
-0.8
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.0
-0.7
-1.1
-0.6
-0.7
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-1.1
-0.8
-0.9
-0.6
-0.8
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.8
-0.6
-1.4
-0.7
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.8
-0.8
-0.9
-0.8
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.0
-0.5
-0.8
-0.7
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.8
-0.8
-0.8
-0.7
-0.8
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.6
-0.7
-1.0
-0.6
-1.0
carbon source
Ying_sugar7 rep B; time point 2
-0.8
-0.6
-0.6
-0.8
-1.0
carbon source
L-Glutamine (C)
+0.8
+0.3
+1.5
+0.9
+0.9
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.4
+0.5
+1.2
+1.1
+1.3
carbon source
acetate (C)
+0.1
-0.1
+1.5
+1.4
+1.5
carbon source
Ying_Others16 rep B; time point 1
+0.5
+0.4
+1.0
+1.1
+1.5
carbon source
acetate (C)
-0.1
+0.1
+1.6
+1.2
+1.7
carbon source
Ying_Others16 rep A; time point 1
+0.5
+0.6
+1.4
+1.1
+1.3
carbon source
Ying_all64 rep C; time point 2
+1.8
+1.8
+1.7
+1.4
+1.5
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.9
+1.2
+2.4
+2.1
+2.3
carbon source
Ying_all64 rep C; time point 3
+2.0
+2.0
+1.8
+1.6
+2.2
carbon source
D-Glucose-6-Phosphate (C)
+1.7
+1.9
+2.2
+2.1
+2.1
carbon source
Glucuronamide (C)
+2.1
+2.1
+2.9
+2.4
+2.1
carbon source
pyruvate (C)
+2.6
+2.2
+2.8
+2.5
+2.7
carbon source
pyruvate (C)
+2.6
+2.5
+3.1
+2.6
+2.8
carbon source
casaminos (C)
+2.4
+2.3
+3.5
+3.3
+3.3
carbon source
L-Asparagine (C)
+3.2
+3.0
+3.6
+3.3
+3.7
carbon source
casaminos (C)
+3.2
+3.2
+3.8
+3.6
+3.6
carbon source
Fumarate (C)
+3.8
+3.4
+4.5
+4.4
+4.1
carbon source
D-Cellobiose (C)
+2.1
+2.2
+5.6
+5.3
+5.3
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ABIE51_RS07320
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