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Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS07165 and ABIE51_RS07170 are separated by 0 nucleotides
ABIE51_RS07170 and ABIE51_RS07175 are separated by 89 nucleotides
ABIE51_RS07175 and ABIE51_RS07180 overlap by 4 nucleotides
ABIE51_RS07180 and ABIE51_RS07185 overlap by 1 nucleotides
ABIE51_RS07165: ABIE51_RS07165 - DnaB-like helicase C-terminal domain-containing protein, at 1,531,331 to 1,532,596
_RS07165
ABIE51_RS07170: ABIE51_RS07170 - hypothetical protein, at 1,532,597 to 1,532,800
_RS07170
ABIE51_RS07175: ABIE51_RS07175 - HNH endonuclease signature motif containing protein, at 1,532,890 to 1,533,228
_RS07175
ABIE51_RS07180: ABIE51_RS07180 - DNA cytosine methyltransferase, at 1,533,225 to 1,533,980
_RS07180
ABIE51_RS07185: ABIE51_RS07185 - DUF968 domain-containing protein, at 1,533,980 to 1,534,315
_RS07185
Group
Condition
ABIE51
_RS07165
ABIE51
_RS07170
ABIE51
_RS07175
ABIE51
_RS07180
ABIE51
_RS07185
carbon source
Ying_sugar7 rep B; time point 3
-1.2
-2.3
-1.8
-1.2
-1.3
carbon source
Ying_sugar7 rep A; time point 3
-1.0
-2.3
-1.7
-1.2
-1.5
carbon source
Ying_all64 rep B; time point 3
-0.9
-2.0
-1.8
-1.1
-1.6
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-1.8
-1.8
-1.1
-1.2
carbon source
Ying_sugar7 rep C; time point 3
-0.9
-1.4
-1.5
-1.1
-1.2
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.3
-2.0
-1.5
-1.1
-1.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.0
-1.3
-1.7
-1.1
-1.3
carbon source
Ying_sugar7 rep A; time point 1
-0.6
-1.4
-1.4
-1.0
-1.0
carbon source
Ying_sugar7 rep C; time point 1
-0.3
-1.4
-1.1
-0.9
-0.9
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.7
-1.0
-0.9
-1.0
-0.9
carbon source
Ying_all64 rep A; time point 3
-0.5
-0.8
-1.5
-0.6
-0.9
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.4
+1.3
+1.0
+1.0
+1.0
carbon source
D-Glucuronic Acid (C)
+0.9
+0.9
+0.9
+1.2
+0.9
carbon source
Ying_Others16 rep A; time point 1
+0.1
+1.1
+1.4
+1.3
+1.3
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.1
+1.2
+1.7
+1.0
+1.2
carbon source
D-Galactose (C)
+0.6
+1.4
+1.1
+1.1
+1.4
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.4
+1.1
+1.6
+1.3
+1.3
carbon source
Ying_Others16 rep B; time point 1
+0.4
+1.5
+1.5
+1.4
+1.5
carbon source
L-Glutamine (C)
+0.5
+2.7
+1.6
+1.0
+1.3
carbon source
Ying_all64 rep C; time point 3
-0.5
+1.9
+1.9
+2.0
+1.8
carbon source
D-Glucose-6-Phosphate (C)
+0.3
+2.5
+2.1
+1.9
+2.1
carbon source
casaminos (C)
-0.4
+2.9
+2.3
+2.3
+2.2
carbon source
Ying_all64 rep C; time point 2
+0.1
+2.2
+2.6
+2.3
+2.4
carbon source
casaminos (C)
+0.1
+2.9
+2.3
+2.4
+2.3
carbon source
pyruvate (C)
+0.4
+3.0
+2.3
+1.9
+2.6
carbon source
Glucuronamide (C)
-0.1
+2.9
+2.7
+2.3
+3.2
carbon source
pyruvate (C)
+0.3
+3.0
+2.8
+2.2
+3.0
carbon source
Fumarate (C)
-0.2
+3.7
+2.6
+2.7
+3.3
carbon source
L-Asparagine (C)
+0.4
+3.8
+3.4
+3.1
+3.3
carbon source
D-Cellobiose (C)
+0.4
+5.0
+4.7
+3.8
+4.9
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