Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS06855 and ABIE51_RS06860 are separated by 141 nucleotidesABIE51_RS06860 and ABIE51_RS06865 overlap by 109 nucleotidesABIE51_RS06865 and ABIE51_RS06870 are separated by 53 nucleotidesABIE51_RS06870 and ABIE51_RS06875 overlap by 11 nucleotides ABIE51_RS06855: ABIE51_RS06855 - YkvA family protein, at 1,474,588 to 1,475,226 _RS06855 ABIE51_RS06860: ABIE51_RS06860 - winged helix-turn-helix domain-containing protein, at 1,475,368 to 1,476,426 _RS06860 ABIE51_RS06865: ABIE51_RS06865 - tetratricopeptide repeat protein, at 1,476,318 to 1,477,613 _RS06865 ABIE51_RS06870: ABIE51_RS06870 - hypothetical protein, at 1,477,667 to 1,478,077 _RS06870 ABIE51_RS06875: ABIE51_RS06875 - ribonuclease HII, at 1,478,067 to 1,478,744 _RS06875
Group Condition ABIE51_RS06855 ABIE51_RS06860 ABIE51_RS06865 ABIE51_RS06870 ABIE51_RS06875
carbon source D-Cellobiose (C) -0.3 +0.1 -0.4 -0.2 -0.3
carbon source L-tyrosine (C) -0.0 -0.3 -0.3 -0.2 -0.2
carbon source Ying_Others16 rep B; time point 1 -0.4 -0.3 -0.1 -0.0 -0.0
carbon source D-Glucuronic Acid (C) -0.3 -0.1 -0.1 -0.1 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.1 -0.2 -0.1 -0.2 +0.0
stress R2A with 1-octen-3-ol 0.904549 mM -0.1 -0.2 +0.0 -0.1 -0.3
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.0 -0.2 +0.0 -0.2 -0.3
dmso control DMSO control -0.3 -0.0 -0.1 +0.1 -0.4
carbon source succinate (C) -0.3 +0.0 -0.1 -0.3 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.1 -0.1 -0.2 -0.0
stress R2A with 2-pentyl-furan 21.3684 mM -0.2 -0.2 +0.1 -0.1 -0.2
carbon source D-Maltose (C) -0.0 +0.1 -0.2 +0.1 -0.4
stress R2A with 2-pentyl-furan 10.6842 mM -0.1 -0.1 +0.1 +0.0 -0.3
carbon source L-Asparagine (C) -0.5 +0.1 -0.1 +0.0 +0.1
r2a no stress control R2A no stress control -0.1 -0.2 +0.1 +0.1 -0.3
carbon source L-Glutamine (C) -0.5 +0.0 +0.1 -0.0 +0.1
carbon source propionate (C) -0.2 +0.1 -0.2 +0.1 -0.2
carbon source pyruvate (C) +0.0 -0.1 -0.1 +0.2 -0.2
carbon source Glucuronamide (C) -0.3 +0.0 -0.1 +0.3 +0.0
stress R2A with 3-octanone 2.65516666666667 mM -0.1 +0.3 +0.0 +0.0 -0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -0.2 +0.1 +0.0 +0.2 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 -0.0 +0.1 -0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 +0.1 +0.1 +0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.1 +0.2 +0.1 +0.2 +0.4
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.4 +0.0 +0.1 +0.1 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 +0.1 +0.3 +0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.1 +0.1 +0.1 +0.2 +0.3
carbon source Fumarate (C) +0.1 +0.2 +0.2 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 +0.3 +0.0 +0.2 +0.3
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 +0.3 +0.2 +0.2 +0.3
remove
ABIE51_RS06855
plot
remove
ABIE51_RS06860
plot
remove
ABIE51_RS06865
remove
ABIE51_RS06870
plot
remove
ABIE51_RS06875
plot