Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS06735 and ABIE51_RS06740 are separated by 11 nucleotidesABIE51_RS06740 and ABIE51_RS06745 are separated by 39 nucleotidesABIE51_RS06745 and ABIE51_RS06750 are separated by 97 nucleotidesABIE51_RS06750 and ABIE51_RS06755 are separated by 130 nucleotides ABIE51_RS06735: ABIE51_RS06735 - DNA polymerase III subunit delta, at 1,439,988 to 1,441,055 _RS06735 ABIE51_RS06740: ABIE51_RS06740 - nicotinate-nucleotide adenylyltransferase, at 1,441,067 to 1,441,744 _RS06740 ABIE51_RS06745: ABIE51_RS06745 - ribosome silencing factor, at 1,441,784 to 1,442,212 _RS06745 ABIE51_RS06750: ABIE51_RS06750 - alkaline phosphatase PhoX, at 1,442,310 to 1,443,860 _RS06750 ABIE51_RS06755: ABIE51_RS06755 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 1,443,991 to 1,444,461 _RS06755
Group Condition ABIE51_RS06735 ABIE51_RS06740 ABIE51_RS06745 ABIE51_RS06750 ABIE51_RS06755
carbon source L-Malic (C) N.D. N.D. -0.6 -0.3 -0.6
stress R2A with 2-pentyl-furan 21.3684 mM N.D. N.D. -0.6 -0.1 -0.6
stress R2A with 2-pentyl-furan 32.0526 mM N.D. N.D. -0.8 +0.0 -0.3
stress R2A with 1-octen-3-ol 0.904549 mM N.D. N.D. -0.4 -0.0 -0.5
stress R2A with 1-octen-3-ol 1.08545883333333 mM N.D. N.D. -0.3 +0.0 -0.6
carbon source D-Galactose (C) N.D. N.D. -0.8 -0.0 -0.0
stress R2A with 2-pentyl-furan 32.0526 mM N.D. N.D. -0.8 +0.0 -0.0
stress R2A with 2-pentyl-furan 10.6842 mM N.D. N.D. -0.4 -0.1 -0.4
stress R2A with 2-pentyl-furan 32.0526 mM N.D. N.D. -0.7 +0.0 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM N.D. N.D. -0.7 +0.0 -0.1
carbon source succinate (C) N.D. N.D. +0.2 -0.1 -0.8
carbon source Ying_all64 rep C; time point 3 N.D. N.D. -0.3 +0.1 -0.4
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. N.D. +0.4 +0.1 -0.6
carbon source D-Maltose (C) N.D. N.D. -0.3 -0.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media N.D. N.D. -0.1 +0.3 +0.6
carbon source Ying_OrganicAcid7 rep A; time point 1 N.D. N.D. +0.2 +0.1 +0.4
carbon source D-Glucuronic Acid (C) N.D. N.D. +0.2 -0.2 +0.8
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus N.D. N.D. +0.2 +0.1 +0.6
carbon source Ying_AminoAcid20 rep C; time point 1 N.D. N.D. +0.5 +0.1 +0.2
carbon source D-Cellobiose (C) N.D. N.D. +0.8 -0.0 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. N.D. +0.7 +0.0 +0.2
carbon source Ying_sugar7 rep C; time point 3 N.D. N.D. +0.4 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media N.D. N.D. +0.1 +0.2 +0.6
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. N.D. +0.4 +0.2 +0.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus N.D. N.D. +0.3 +0.2 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media N.D. N.D. +0.2 +0.2 +0.5
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. N.D. +0.3 +0.3 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. N.D. +0.8 -0.0 +0.3
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. N.D. +0.4 +0.3 +0.5
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. N.D. +0.6 +0.0 +0.5
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