Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS06410 and ABIE51_RS06415 are separated by 14 nucleotidesABIE51_RS06415 and ABIE51_RS06420 are separated by 119 nucleotidesABIE51_RS06420 and ABIE51_RS06425 are separated by 187 nucleotidesABIE51_RS06425 and ABIE51_RS06430 are separated by 294 nucleotides ABIE51_RS06410: ABIE51_RS06410 - glutathione-disulfide reductase, at 1,368,140 to 1,369,486 _RS06410 ABIE51_RS06415: ABIE51_RS06415 - N-formylglutamate deformylase, at 1,369,501 to 1,370,304 _RS06415 ABIE51_RS06420: ABIE51_RS06420 - PQQ-binding-like beta-propeller repeat protein, at 1,370,424 to 1,371,944 _RS06420 ABIE51_RS06425: ABIE51_RS06425 - DNA topoisomerase IV subunit B, at 1,372,132 to 1,374,039 _RS06425 ABIE51_RS06430: ABIE51_RS06430 - hypothetical protein, at 1,374,334 to 1,374,567 _RS06430
Group Condition ABIE51_RS06410 ABIE51_RS06415 ABIE51_RS06420 ABIE51_RS06425 ABIE51_RS06430
carbon source Ying_all64 rep B; time point 3 -0.1 -1.3 +0.1 N.D. -3.1
carbon source Ying_all64 rep C; time point 3 -0.1 -1.1 -0.1 N.D. -1.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -1.1 +0.1 N.D. -1.2
carbon source Ying_sugar7 rep B; time point 3 -0.0 -0.3 +0.2 N.D. -2.1
carbon source Ying_all64 rep A; time point 3 -0.1 -1.2 +0.2 N.D. -1.2
carbon source Ying_all64 rep C; time point 2 -0.3 -0.8 -0.1 N.D. -1.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 -1.1 +0.1 N.D. -0.7
carbon source Ying_all64 rep B; time point 2 -0.1 -0.9 +0.0 N.D. -0.8
carbon source Ying_AminoAcid20 rep C; time point 3 -0.0 -1.3 +0.1 N.D. -0.5
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 -0.6 -0.0 N.D. -0.8
carbon source Ying_AminoAcid20 rep A; time point 2 -0.0 -0.7 +0.2 N.D. -0.8
carbon source Ying_all64 rep A; time point 2 +0.1 -0.8 -0.1 N.D. -0.5
carbon source Ying_sugar7 rep C; time point 2 +0.0 -0.0 +0.1 N.D. -1.4
carbon source Ying_all64 rep B; time point 1 +0.2 -0.5 +0.1 N.D. -1.0
carbon source Ying_sugar7 rep A; time point 2 -0.2 -0.1 -0.0 N.D. -0.8
carbon source Ying_all64 rep A; time point 1 -0.0 -0.6 +0.0 N.D. -0.6
carbon source Ying_AminoAcid20 rep C; time point 1 -0.0 -0.4 +0.1 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 -0.2 -0.0 N.D. -0.7
carbon source Ying_sugar7 rep A; time point 3 +0.1 -0.2 +0.2 N.D. -1.2
carbon source acetate (C) +0.1 +0.1 -0.0 N.D. -1.1
carbon source propionate (C) +0.1 -0.2 -0.1 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 -0.0 +0.1 N.D. -1.1
carbon source Ying_sugar7 rep C; time point 3 +0.1 -0.2 +0.2 N.D. -1.0
carbon source Ying_all64 rep C; time point 1 +0.0 -0.5 +0.1 N.D. -0.5
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 +0.1 +0.0 N.D. -1.0
carbon source succinate (C) +0.2 +0.1 -0.0 N.D. -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 +0.0 +0.1 N.D. -0.9
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.2 +0.2 +0.0 N.D. -0.8
carbon source Fumarate (C) +0.4 +0.2 -0.4 N.D. -0.3
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 -0.1 +0.1 N.D. +1.0
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