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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS06185 and ABIE51_RS06190 are separated by 1 nucleotides
ABIE51_RS06190 and ABIE51_RS06195 are separated by 197 nucleotides
ABIE51_RS06195 and ABIE51_RS06200 are separated by 90 nucleotides
ABIE51_RS06200 and ABIE51_RS06205 are separated by 29 nucleotides
ABIE51_RS06185: ABIE51_RS06185 - ribonuclease E inhibitor RraB, at 1,323,499 to 1,323,855
_RS06185
ABIE51_RS06190: ABIE51_RS06190 - ferritin-like domain-containing protein, at 1,323,857 to 1,324,663
_RS06190
ABIE51_RS06195: ABIE51_RS06195 - UDP-2,3-diacylglucosamine diphosphatase, at 1,324,861 to 1,325,601
_RS06195
ABIE51_RS06200: ABIE51_RS06200 - glutamate--tRNA ligase, at 1,325,692 to 1,327,099
_RS06200
ABIE51_RS06205: ABIE51_RS06205 - transcriptional repressor, at 1,327,129 to 1,327,620
_RS06205
Group
Condition
ABIE51
_RS06185
ABIE51
_RS06190
ABIE51
_RS06195
ABIE51
_RS06200
ABIE51
_RS06205
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.2
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
N.D.
-0.2
N.D.
N.D.
N.D.
dmso control
DMSO control
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
N.D.
-0.2
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
N.D.
-0.1
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.1
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
acetate (C)
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
Fumarate (C)
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
propionate (C)
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 1.77016666666667 mM
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 1.77016666666667 mM
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
N.D.
+0.2
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
acetate (C)
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
L-Asparagine (C)
N.D.
+0.2
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
N.D.
+0.3
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.3
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.3
N.D.
N.D.
N.D.
carbon source
D-Glucuronic Acid (C)
N.D.
+0.3
N.D.
N.D.
N.D.
carbon source
casaminos (C)
N.D.
+0.4
N.D.
N.D.
N.D.
carbon source
Glucuronamide (C)
N.D.
+0.5
N.D.
N.D.
N.D.
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