Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS06000 and ABIE51_RS06005 are separated by 101 nucleotidesABIE51_RS06005 and ABIE51_RS06010 are separated by 152 nucleotidesABIE51_RS06010 and ABIE51_RS06015 are separated by 95 nucleotidesABIE51_RS06015 and ABIE51_RS06020 are separated by 261 nucleotides ABIE51_RS06000: ABIE51_RS06000 - pyridoxal phosphate-dependent aminotransferase, at 1,275,925 to 1,277,130 _RS06000 ABIE51_RS06005: ABIE51_RS06005 - malate dehydrogenase, at 1,277,232 to 1,278,215 _RS06005 ABIE51_RS06010: ABIE51_RS06010 - propionate--CoA ligase, at 1,278,368 to 1,280,260 _RS06010 ABIE51_RS06015: ABIE51_RS06015 - methylisocitrate lyase, at 1,280,356 to 1,281,243 _RS06015 ABIE51_RS06020: ABIE51_RS06020 - 2-methylcitrate synthase, at 1,281,505 to 1,282,650 _RS06020
Group Condition ABIE51_RS06000 ABIE51_RS06005 ABIE51_RS06010 ABIE51_RS06015 ABIE51_RS06020
carbon source Ying_AminoAcid20 rep C; time point 3 -3.9 N.D. -0.1 -2.7 -4.6
carbon source Ying_AminoAcid20 rep B; time point 3 -4.0 N.D. -0.1 -1.9 -4.9
carbon source Ying_AminoAcid20 rep A; time point 3 -4.0 N.D. -0.1 -2.0 -4.3
carbon source Ying_AminoAcid20 rep B; time point 2 -4.8 N.D. -0.0 -1.9 -3.2
carbon source Ying_AminoAcid20 rep C; time point 2 -5.0 N.D. -0.1 -1.1 -3.6
carbon source Ying_AminoAcid20 rep A; time point 2 -4.7 N.D. -0.1 -1.3 -3.4
carbon source Ying_AminoAcid20 rep A; time point 1 -4.3 N.D. -0.1 -1.4 -2.1
carbon source Ying_all64 rep A; time point 2 -4.7 N.D. -0.0 -2.8 -0.3
carbon source Ying_all64 rep C; time point 2 -4.5 N.D. +0.1 -2.8 -0.3
carbon source Ying_AminoAcid20 rep B; time point 1 -4.4 N.D. -0.1 -0.7 -2.1
carbon source Ying_all64 rep B; time point 2 -4.5 N.D. +0.1 -2.2 -0.3
carbon source Ying_AminoAcid20 rep C; time point 1 -4.3 N.D. -0.1 -0.5 -1.9
carbon source Ying_all64 rep A; time point 1 -3.8 N.D. +0.0 -2.6 -0.0
carbon source Ying_all64 rep C; time point 3 -3.9 N.D. +0.1 -1.7 -0.5
carbon source Ying_all64 rep B; time point 3 -3.2 N.D. -0.1 -2.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.7 N.D. +0.0 -3.0 +0.0
carbon source Ying_all64 rep A; time point 3 -3.4 N.D. -0.0 -1.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -2.2 N.D. +0.0 -3.1 -0.0
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -2.2 N.D. +0.2 -3.2 +0.0
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -2.3 N.D. +0.0 -2.8 -0.1
stress R2A with 3-octanone 5.31033333333333 mM -2.3 N.D. +0.1 -2.8 -0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -1.7 N.D. +0.1 -3.3 -0.0
stress R2A with 3-octanone 2.65516666666667 mM -2.1 N.D. -0.0 -2.7 -0.2
carbon source casaminos (C) -3.3 N.D. +0.1 -1.4 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.0 N.D. +0.1 -3.0 -0.0
stress R2A with 3-octanone 5.31033333333333 mM -2.2 N.D. +0.1 -2.6 -0.2
carbon source Ying_sugar7 rep A; time point 2 -5.0 N.D. +0.0 +0.5 -0.2
carbon source Ying_sugar7 rep C; time point 2 -4.9 N.D. +0.0 +0.7 -0.1
carbon source Ying_sugar7 rep B; time point 2 -4.9 N.D. +0.0 +0.9 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -4.0 N.D. -0.1 +1.1 -0.1
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